RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 MYBPC3Q14896 1274 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 TM4SF20Q53R12 229 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 DCAF10Q5QP82 559 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 GPRC6AQ5T6X5 926 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 C1orf189Q5VU69 101 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 PDPK2PQ6A1A2 396 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 SP5Q6BEB4 398 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 CYB5D1Q6P9G0 228 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 IGFL3Q6UXB1 125 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 NPNTQ6UXI9 565 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 WASH2PQ6VEQ5 465 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 CDHR3Q6ZTQ4 885 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 MED25Q71SY5 747 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 DET1Q7L5Y6 550 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 DAAM2Q86T65 1068 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 TRIM73Q86UV7 250 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 FJX1Q86VR8 437 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 OOSP2Q86WS3 158 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 KMT5CQ86Y97 462 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 RAB43Q86YS6 212 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 HPS6Q86YV9 775 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 RBM12BQ8IXT5 1001 aaKnown RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 RAVER1Q8IY67 606 aaKnown RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 SLC34A3Q8N130 599 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 NDUFAF2Q8N183 169 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 GALNT16Q8N428 558 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 AMER2Q8N7J2 671 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 PLD5Q8N7P1 536 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 NIPA2Q8N8Q9 360 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 RASGEF1AQ8N9B8 481 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 SPATA22Q8NHS9 363 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 UHMK1Q8TAS1 419 aaKnown RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 CCHCR1Q8TD31 782 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 GRHL3Q8TE85 626 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 TEKT4Q8WW24 435 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 CPT1BQ92523 772 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 TADA1Q96BN2 335 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 FAF2Q96CS3 445 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 HDAC11Q96DB2 347 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 PKNOX2Q96KN3 472 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 LURAP1Q96LR2 239 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 C12orf66Q96MD2 445 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 TSGA13Q96PP4 275 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 VPS35Q96QK1 796 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 CD180Q99467 661 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 TRIM8Q9BZR9 551 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 THAP2Q9H0W7 228 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 NUP62CLQ9H1M0 184 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 DEF6Q9H4E7 631 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 ACTR5Q9H9F9 607 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 UGT1A7Q9HAW7 530 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 UGT1A10Q9HAW8 530 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 UGT1A8Q9HAW9 530 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 FAM60AQ9NP50 221 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 C5AR2Q9P296 337 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 MYOTQ9UBF9 498 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 FBLN5Q9UBX5 448 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 LIMA1Q9UHB6 759 aaKnown RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 SLC24A2Q9UI40 661 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 ANAPC7Q9UJX3 599 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 ITGB1BP2Q9UKP3 347 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 RPL26L1Q9UNX3 145 aaKnown RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 CDYLQ9Y232 598 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 MAP1AP78559 2803 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 NAV3Q8IVL0 2385 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 FBN3Q75N90 2809 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 RGSL1A5PLK6 1076 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 C19orf84I3L1E1 186 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 BTN3A3O00478 584 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 POP7O75817 140 aaKnown RBP3.8□□□□□ -1.8
PTPRM-206ENST00000578093 WISP2O76076 250 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 KLK3P07288 261 aaPredicted RBP3.8□□□□□ -1.8
PTPRM-206ENST00000578093 STSP08842 583 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 SKILP12757 684 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 KRT15P19012 456 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 HLA-DPA1P20036 260 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 CDH3P22223 829 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 CA4P22748 312 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 CCNCP24863 283 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 PRKCIP41743 596 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 GABRA4P48169 554 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 RRADP55042 308 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 KCNK10P57789 538 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 IFI35P80217 286 aaPredicted RBP3.8□□□□□ -1.8
PTPRM-206ENST00000578093 PPIDQ08752 370 aaKnown RBP3.8□□□□□ -1.8
PTPRM-206ENST00000578093 Q0VFX4 171 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 GTF2H3Q13889 308 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 CDSNQ15517 529 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 ZIC1Q15915 447 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 ASIC2Q16515 512 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 BOLA3Q53S33 107 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 TMEM177Q53S58 311 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 FIGNQ5HY92 759 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 MLIPQ5VWP3 458 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 LYPLAL1Q5VWZ2 237 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
PTPRM-206ENST00000578093 TIGD7Q6NT04 549 aaPredicted RBP3.8□□□□□ -1.8
PTPRM-206ENST00000578093 TMEM220Q6QAJ8 160 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 KDELC1Q6UW63 502 aa3.8□□□□□ -1.8
PTPRM-206ENST00000578093 FAM151BQ6UXP7 276 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms