RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PLTPP55058 493 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 MGAT5Q09328 741 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 NCF4Q15080 339 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 PTCHD3Q3KNS1 767 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 TRMT10BQ6PF06 316 aaKnown RBP15.4■□□□□ 0.06
VAPA-204ENST00000577901 SPESP1Q6UW49 350 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 RBMXL3Q8N7X1 1067 aaKnown RBP15.4■□□□□ 0.06
VAPA-204ENST00000577901 PNPLA2Q96AD5 504 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 OR2A14Q96R47 310 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 GPR21Q99679 349 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 WDR83Q9BRX9 315 aaKnown RBP15.4■□□□□ 0.06
VAPA-204ENST00000577901 SLC7A5P2Q9GIP4 190 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 PLAC1Q9HBJ0 212 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 SAYSD1Q9NPB0 183 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 FAM114A2Q9NRY5 505 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 TAS2R13Q9NYV9 303 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 ZFATQ9P243 1243 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 TRMT6Q9UJA5 497 aaKnown RBP15.4■□□□□ 0.06
VAPA-204ENST00000577901 TSR3Q9UJK0 312 aaKnown RBP15.4■□□□□ 0.06
VAPA-204ENST00000577901 SERTAD3Q9UJW9 196 aa15.4■□□□□ 0.06
VAPA-204ENST00000577901 DDAH2O95865 285 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 CATP04040 527 aaKnown RBP15.39■□□□□ 0.05
VAPA-204ENST00000577901 MPC1LP0DKB6 136 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 ST6GAL1P15907 406 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 UGT2B7P16662 529 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 GABRB3P28472 473 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 RRADP55042 308 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 RAPSNQ13702 412 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 ATP1A4Q13733 1029 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 GRB7Q14451 532 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 FASTKD3Q14CZ7 662 aaKnown RBP15.39■□□□□ 0.05
VAPA-204ENST00000577901 LRRC8EQ6NSJ5 796 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 OR2L8Q8NGY9 312 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 PRR7Q8TB68 274 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 TCTN2Q96GX1 697 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 TRAPPC9Q96Q05 1148 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 NDNQ99608 321 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 SMAD5Q99717 465 aaKnown RBP15.39■□□□□ 0.05
VAPA-204ENST00000577901 DPH2Q9BQC3 489 aaPredicted RBP15.39■□□□□ 0.05
VAPA-204ENST00000577901 LRRC1Q9BTT6 524 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 SPHK1Q9NYA1 384 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 MOCS1Q9NZB8 636 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 CIDEBQ9UHD4 219 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 CORO1CQ9ULV4 474 aaPredicted RBP15.39■□□□□ 0.05
VAPA-204ENST00000577901 RUVBL2Q9Y230 463 aaKnown RBP15.39■□□□□ 0.05
VAPA-204ENST00000577901 MED16Q9Y2X0 877 aa15.39■□□□□ 0.05
VAPA-204ENST00000577901 CTAGE15A4D2H0 777 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 C9J4A7 227 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 E7EQ34 232 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 EIF3FO00303 357 aaPredicted RBP15.38■□□□□ 0.05
VAPA-204ENST00000577901 PSIP1O75475 530 aaKnown RBP15.38■□□□□ 0.05
VAPA-204ENST00000577901 CTAGE8P0CG41 777 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 AGXTP21549 392 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 BDKRB1P46663 353 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 RGS4P49798 205 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 SLC7A5Q01650 507 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 CUL1Q13616 776 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 SLC5A12Q1EHB4 618 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 CTAGE6Q86UF2 777 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 SLC26A11Q86WA9 606 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 RAB43Q86YS6 212 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 CTAGE4Q8IX94 777 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 CPNE9Q8IYJ1 553 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 MMGT1Q8N4V1 131 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 GIMAP7Q8NHV1 300 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 FBXO25Q8TCJ0 367 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 CD200R1Q8TD46 325 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 C19orf60Q96EN9 201 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 SLC30A3Q99726 388 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 MENTQ9BUN1 341 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 PHACTR1Q9C0D0 580 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 KLHL25Q9H0H3 589 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 NSMCE4AQ9NXX6 385 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 SPATA7Q9P0W8 599 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 PADI2Q9Y2J8 665 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 VWA7Q9Y334 891 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 ICE1Q9Y2F5 2266 aa15.38■□□□□ 0.05
VAPA-204ENST00000577901 SPTBN1Q01082 2364 aaKnown RBP15.38■□□□□ 0.05
VAPA-204ENST00000577901 SHANK1Q9Y566 2161 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 A0A0J9YY10 115 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 ZNF749O43361 778 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 ZBTB14O43829 449 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 HBQ1P09105 142 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 PVRP15151 417 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 MCM3P25205 808 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 OTX2P32243 289 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 HSD17B2P37059 387 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 ILF2Q12905 390 aaKnown RBP15.37■□□□□ 0.05
VAPA-204ENST00000577901 TRADDQ15628 312 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 SF1Q15637 639 aaKnown RBP15.37■□□□□ 0.05
VAPA-204ENST00000577901 CCSMST1Q4G0I0 132 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 FAM45BPQ6NSW5 357 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 C3orf62Q6ZUJ4 267 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 CCDC25Q86WR0 208 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 C2orf73Q8N5S3 287 aaPredicted RBP15.37■□□□□ 0.05
VAPA-204ENST00000577901 GPATCH11Q8N954 259 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 C19orf47Q8N9M1 422 aaKnown RBP15.37■□□□□ 0.05
VAPA-204ENST00000577901 LINC01555Q8NAE3 123 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 OR9A1PQ8NGU1 263 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 HMGCLL1Q8TB92 370 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms