RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PLD2O14939 933 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 TAPBPO15533 448 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 WDR47O94967 919 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 SPINK2P20155 84 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 TAC1P20366 129 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 MAGP20916 626 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 GGT5P36269 586 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 MLLT3P42568 568 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-217ENST00000575711 SLC6A12P48065 614 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 HSPA7P48741 367 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 PFKFB4Q16877 469 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 ZXDCQ2QGD7 858 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-217ENST00000575711 C18orf21Q32NC0 220 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-217ENST00000575711 CCDC153Q494R4 210 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 C16orf46Q6P387 395 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 CYB5D1Q6P9G0 228 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 FOXR1Q6PIV2 292 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 LRRC70Q7Z2Q7 622 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 THOC6Q86W42 341 aaKnown RBP13.46□□□□□ -0.25
RPAIN-217ENST00000575711 C17orf64Q86WR6 236 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 KLHDC8AQ8IYD2 350 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 D2HGDHQ8N465 521 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 ZUFSPQ96AP4 578 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 ZBTB9Q96C00 473 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 TCTN2Q96GX1 697 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 IQCGQ9H095 443 aaKnown RBP13.46□□□□□ -0.25
RPAIN-217ENST00000575711 MKS1Q9NXB0 559 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 ANKMY1Q9P2S6 941 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 SLC22A14Q9Y267 594 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 BTRCQ9Y297 605 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 KLHL20Q9Y2M5 609 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 DYRK1BQ9Y463 629 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 TARM1B6A8C7 271 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 KLK8O60259 260 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 CCNT2O60583 730 aaKnown RBP13.45□□□□□ -0.26
RPAIN-217ENST00000575711 STK16O75716 305 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 HGFP14210 728 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 NPPBP16860 134 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 HRH2P25021 359 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 GRIA3P42263 894 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 GDF5P43026 501 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 ALDH18A1P54886 795 aaKnown RBP13.45□□□□□ -0.26
RPAIN-217ENST00000575711 GABREP78334 506 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 ACY1Q03154 408 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 KCNAB1Q14722 419 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 SETDB1Q15047 1291 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 FBXO48Q5FWF7 155 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 FIGLAQ6QHK4 219 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 CDHR3Q6ZTQ4 885 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 ADCK2Q7Z695 626 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 BANPQ8N9N5 519 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 UBTD2Q8WUN7 234 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 ESAMQ96AP7 390 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 OR4K3Q96R72 315 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 DPH7Q9BTV6 452 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 CD244Q9BZW8 370 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 NRSN2Q9GZP1 204 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 CHRNA10Q9GZZ6 450 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 VIPAS39Q9H9C1 493 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 POLR1BQ9H9Y6 1135 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 FANCEQ9HB96 536 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 SLC6A20Q9NP91 592 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 DNAJC11Q9NVH1 559 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 OCIAD1Q9NX40 245 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 PISDQ9UG56 409 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 SNX7Q9UNH6 387 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 MSRB2Q9Y3D2 182 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 PCDHGA8Q9Y5G5 932 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 KLK4Q9Y5K2 254 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 TNPO3Q9Y5L0 923 aaKnown RBP13.45□□□□□ -0.26
RPAIN-217ENST00000575711 KCNE2Q9Y6J6 123 aa13.45□□□□□ -0.26
RPAIN-217ENST00000575711 A0A1W2PNU3 283 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-217ENST00000575711 B4E171 279 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 PRAMEF10O60809 474 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 SPAG7O75391 227 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 SBK3P0C264 359 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 EBLN1P0CF75 366 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 FGF3P11487 239 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-217ENST00000575711 CCL4P13236 92 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 ITIH1P19827 911 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 TSPAN7P41732 249 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 AGTR2P50052 363 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 MAPK10P53779 464 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 RAB15P59190 212 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 YBX1P67809 324 aaKnown RBP13.44□□□□□ -0.26
RPAIN-217ENST00000575711 SH3BP2P78314 561 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 MC2RQ01718 297 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 FOXM1Q08050 763 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 CDC16Q13042 620 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 CAMK2BQ13554 666 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 ZIC1Q15915 447 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 TNFAIP8L3Q5GJ75 292 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 ZC3H12BQ5HYM0 836 aaKnown RBP13.44□□□□□ -0.26
RPAIN-217ENST00000575711 FCRL6Q6DN72 434 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 TMEM151AQ8N4L1 468 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 PTGR2Q8N8N7 351 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-217ENST00000575711 SNX31Q8N9S9 440 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 CCDC63Q8NA47 563 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 SLC5A11Q8WWX8 675 aa13.44□□□□□ -0.26
RPAIN-217ENST00000575711 N4BP2L2Q92802 583 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms