RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 CDKL1Q00532 357 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 CLN3Q13286 438 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 TSNQ15631 228 aaKnown RBP14.62□□□□□ -0.07
LITAF-217ENST00000575426 DEFB110Q30KQ9 67 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 MANEAQ5SRI9 462 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 PRAMEF13Q5VWM6 474 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 FCRL6Q6DN72 434 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 PWWP2BQ6NUJ5 590 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 C6orf15Q6UXA7 325 aaPredicted RBP14.62□□□□□ -0.07
LITAF-217ENST00000575426 ADCK2Q7Z695 626 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 GPSM1Q86YR5 675 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 SPACA3Q8IXA5 215 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 CACNA2D3Q8IZS8 1091 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 CNPY4Q8N129 248 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 SPATA6LQ8N4H0 392 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 DNAJC22Q8N4W6 341 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 UBXN10Q96LJ8 280 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 DPH7Q9BTV6 452 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 SNX15Q9NRS6 342 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.62□□□□□ -0.07
LITAF-217ENST00000575426 PILRAQ9UKJ1 303 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 IKZF3Q9UKT9 509 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 RNF112Q9ULX5 631 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 SNX7Q9UNH6 387 aa14.62□□□□□ -0.07
LITAF-217ENST00000575426 V9GYY5 206 aaPredicted RBP14.62□□□□□ -0.07
LITAF-217ENST00000575426 ANKRD11Q6UB99 2663 aaPredicted RBP14.62□□□□□ -0.07
LITAF-217ENST00000575426 AHCTF1Q8WYP5 2266 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 A0A096LPK6 155 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 CPNE3O75131 537 aaKnown RBP14.61□□□□□ -0.07
LITAF-217ENST00000575426 OR2B3O76000 313 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 WISP3O95389 354 aaPredicted RBP14.61□□□□□ -0.07
LITAF-217ENST00000575426 NTRK1P04629 796 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 C2P06681 752 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 SNRPAP09012 282 aaKnown RBP14.61□□□□□ -0.07
LITAF-217ENST00000575426 HBQ1P09105 142 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 SLC35E2BP0CK96 405 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 HRH2P25021 359 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 HNMTP50135 292 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 UCNP55089 124 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 VSNL1P62760 191 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 MAP7Q14244 749 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 TGIF1Q15583 401 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 FAM83EQ2M2I3 478 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 KLC3Q6P597 504 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 C17orf64Q86WR6 236 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 DTX1Q86Y01 620 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 MCATQ8IVS2 390 aaKnown RBP14.61□□□□□ -0.07
LITAF-217ENST00000575426 LRRC56Q8IYG6 542 aaPredicted RBP14.61□□□□□ -0.07
LITAF-217ENST00000575426 ESX1Q8N693 406 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 OR1L3Q8NH93 324 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 STAG3L4Q8TBR4 150 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 DCAKDQ8WVC6 231 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 HNRNPLLQ8WVV9 542 aaKnown RBP14.61□□□□□ -0.07
LITAF-217ENST00000575426 NKD1Q969G9 470 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 KIAA1191Q96A73 305 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 KIAA1143Q96AT1 154 aaPredicted RBP14.61□□□□□ -0.07
LITAF-217ENST00000575426 CLIP3Q96DZ5 547 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 HAUS8Q9BT25 410 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 VPS11Q9H270 941 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 EURLQ9NYK6 297 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 AP1M2Q9Y6Q5 423 aa14.61□□□□□ -0.07
LITAF-217ENST00000575426 DMXL2Q8TDJ6 3036 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 IQANK1A0A1B0GTG1 560 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 HMX2A2RU54 273 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 TIAF1O95411 115 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 DLGAP3O95886 979 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 KLK3P07288 261 aaPredicted RBP14.6□□□□□ -0.07
LITAF-217ENST00000575426 ZNF28P17035 718 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 TFEBP19484 476 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 PPP1R3AQ16821 1122 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 ERCC6LQ2NKX8 1250 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 TCTE1Q5JU00 501 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 WDR93Q6P2C0 686 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 TLDC1Q6P9B6 456 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 LCTLQ6UWM7 567 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 TCAIMQ8N3R3 496 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 GALNT6Q8NCL4 622 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 OR56A3Q8NH54 315 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 PYCR2Q96C36 320 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 NXNL1Q96CM4 212 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 RNF31Q96EP0 1072 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 TSNARE1Q96NA8 513 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 CCNL2Q96S94 520 aaPredicted RBP14.6□□□□□ -0.07
LITAF-217ENST00000575426 SELENOSQ9BQE4 189 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 PLCD4Q9BRC7 762 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 EFHD1Q9BUP0 239 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 SPRY4Q9C004 299 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 ACTR5Q9H9F9 607 aaPredicted RBP14.6□□□□□ -0.07
LITAF-217ENST00000575426 SLC6A20Q9NP91 592 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 TMEM184CQ9NVA4 438 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 CD274Q9NZQ7 290 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 PADI1Q9ULC6 663 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 DYRK1BQ9Y463 629 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 PCDHB3Q9Y5E6 796 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 KLK4Q9Y5K2 254 aa14.6□□□□□ -0.07
LITAF-217ENST00000575426 A0A0J9YVX5 310 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 TEX51A0A1B0GUA7 166 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 CCDC189A1A4V9 331 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 OR2A25A4D2G3 310 aa14.59□□□□□ -0.07
LITAF-217ENST00000575426 NCF1BA6NI72 391 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms