RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ACAT2Q9BWD1 397 aa16.47■□□□□ 0.23
NUP88-210ENST00000574867 STRADBQ9C0K7 418 aa16.47■□□□□ 0.23
NUP88-210ENST00000574867 ZNF768Q9H5H4 540 aaKnown RBP16.47■□□□□ 0.23
NUP88-210ENST00000574867 MRPS30Q9NP92 439 aaKnown RBP16.47■□□□□ 0.23
NUP88-210ENST00000574867 ABCF3Q9NUQ8 709 aa16.47■□□□□ 0.23
NUP88-210ENST00000574867 DNAJC11Q9NVH1 559 aa16.47■□□□□ 0.23
NUP88-210ENST00000574867 ANKMY1Q9P2S6 941 aa16.47■□□□□ 0.23
NUP88-210ENST00000574867 KLK4Q9Y5K2 254 aa16.47■□□□□ 0.23
NUP88-210ENST00000574867 PCM1Q15154 2024 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 HGSO14964 777 aaPredicted RBP16.46■□□□□ 0.23
NUP88-210ENST00000574867 KIF1CO43896 1103 aaKnown RBP16.46■□□□□ 0.23
NUP88-210ENST00000574867 ZWINTO95229 277 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 ZBTB11O95625 1053 aaPredicted RBP16.46■□□□□ 0.23
NUP88-210ENST00000574867 HRH2P25021 359 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 MPSTP25325 297 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 ISXQ2M1V0 245 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 C18orf21Q32NC0 220 aaPredicted RBP16.46■□□□□ 0.23
NUP88-210ENST00000574867 ARHGAP22Q7Z5H3 698 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 B3GNT8Q7Z7M8 397 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 C17orf64Q86WR6 236 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 PHF21BQ96EK2 531 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 COPG2Q9UBF2 871 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 OPTCQ9UBM4 332 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 SLC22A14Q9Y267 594 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 DYRK1BQ9Y463 629 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 KCNE2Q9Y6J6 123 aa16.46■□□□□ 0.23
NUP88-210ENST00000574867 G3V2L1 256 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 K7EPI3 171 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 DLX3O60479 287 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 CCNT2O60583 730 aaKnown RBP16.46■□□□□ 0.22
NUP88-210ENST00000574867 CSO75390 466 aaKnown RBP16.46■□□□□ 0.22
NUP88-210ENST00000574867 CPA3P15088 417 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 NPPBP16860 134 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 PIK3CGP48736 1102 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 AGTR2P50052 363 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 SLC18A1P54219 525 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 CDC16Q13042 620 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 PDK4Q16654 411 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 TTMPQ5BVD1 217 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 TRIM73Q86UV7 250 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 ARMC2Q8NEN0 867 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 KLHL6Q8WZ60 621 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 OR4K3Q96R72 315 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 C1QTNF3Q9BXJ4 246 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 CAPS2Q9BXY5 557 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 C12orf65Q9H3J6 166 aaKnown RBP16.46■□□□□ 0.22
NUP88-210ENST00000574867 KCNK9Q9NPC2 374 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 GPRC5BQ9NZH0 403 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 SLC17A7Q9P2U7 560 aa16.46■□□□□ 0.22
NUP88-210ENST00000574867 IGHV5-51A0A0C4DH38 117 aa16.45■□□□□ 0.22
NUP88-210ENST00000574867 MAP3K7O43318 606 aa16.45■□□□□ 0.22
NUP88-210ENST00000574867 GDF5P43026 501 aa16.45■□□□□ 0.22
NUP88-210ENST00000574867 LSSP48449 732 aa16.45■□□□□ 0.22
NUP88-210ENST00000574867 FBXO48Q5FWF7 155 aa16.45■□□□□ 0.22
NUP88-210ENST00000574867 KIAA1614Q5VZ46 1190 aa16.45■□□□□ 0.22
NUP88-210ENST00000574867 C19orf47Q8N9M1 422 aaKnown RBP16.45■□□□□ 0.22
NUP88-210ENST00000574867 ZUFSPQ96AP4 578 aa16.45■□□□□ 0.22
NUP88-210ENST00000574867 LIN37Q96GY3 246 aaPredicted RBP16.45■□□□□ 0.22
NUP88-210ENST00000574867 SLC41A2Q96JW4 573 aa16.45■□□□□ 0.22
NUP88-210ENST00000574867 PPM1MQ96MI6 270 aa16.45■□□□□ 0.22
NUP88-210ENST00000574867 TRAPPC9Q96Q05 1148 aa16.45■□□□□ 0.22
NUP88-210ENST00000574867 CHRNA10Q9GZZ6 450 aa16.45■□□□□ 0.22
NUP88-210ENST00000574867 AKAP7Q9P0M2 348 aaPredicted RBP16.45■□□□□ 0.22
NUP88-210ENST00000574867 SNRNP200O75643 2136 aaKnown RBP16.45■□□□□ 0.22
NUP88-210ENST00000574867 ST6GAL1P15907 406 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 GNAZP19086 355 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 MAGP20916 626 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 EEF1DP29692 281 aaKnown RBP16.44■□□□□ 0.22
NUP88-210ENST00000574867 PRKAA2P54646 552 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 HERVK_113P63132 956 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 SLC5A11Q8WWX8 675 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 ESAMQ96AP7 390 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 ERVK-6Q9BXR3 956 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 BTRCQ9Y297 605 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 ASB1Q9Y576 335 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 ADAMTS20P59510 1910 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 TMEM120BA0PK00 339 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 SLC9B1P1A6NJY1 282 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 A8MU76 341 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 E2F3O00716 465 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 SIX3O95343 332 aaPredicted RBP16.44■□□□□ 0.22
NUP88-210ENST00000574867 RPS17P08708 135 aaKnown RBP16.44■□□□□ 0.22
NUP88-210ENST00000574867 EPB42P16452 691 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 NELFEP18615 380 aaKnown RBP16.44■□□□□ 0.22
NUP88-210ENST00000574867 GRIA3P42263 894 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 ETV4P43268 484 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 ARL4DP49703 201 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 CLDN6P56747 220 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 NAA20P61599 178 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 HSD11B2P80365 405 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 ASPHQ12797 758 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 EIF3IQ13347 325 aaKnown RBP16.44■□□□□ 0.22
NUP88-210ENST00000574867 PCLAFQ15004 111 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 TMPRSS7Q7RTY8 843 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 SNX31Q8N9S9 440 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 AGBL5Q8NDL9 886 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 RCBTB1Q8NDN9 531 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 L3HYPDHQ96EM0 354 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 TCTN2Q96GX1 697 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 DPH7Q9BTV6 452 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms