RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 KCNAB1Q14722 419 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 SETDB1Q15047 1291 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 AARS2Q5JTZ9 985 aaKnown RBP10.24□□□□□ -0.77
LITAF-216ENST00000574848 RNF187Q5TA31 235 aaPredicted RBP10.24□□□□□ -0.77
LITAF-216ENST00000574848 PWWP2BQ6NUJ5 590 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 ARMC6Q6NXE6 501 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 ZNF517Q6ZMY9 492 aaPredicted RBP10.24□□□□□ -0.77
LITAF-216ENST00000574848 ZNF605Q86T29 641 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 NUDCD3Q8IVD9 361 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 UNC5BQ8IZJ1 945 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 OR4L1Q8NH43 312 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 PPP1R14CQ8TAE6 165 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 RDH11Q8TC12 318 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 LCN9Q8WX39 176 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 TSPAN17Q96FV3 270 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 VPS39Q96JC1 886 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 LRFN5Q96NI6 719 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 TTC1Q99614 292 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 GPR22Q99680 433 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 ARHGAP9Q9BRR9 750 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 TSSK1BQ9BXA7 367 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 SRMSQ9H3Y6 488 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 ACTR5Q9H9F9 607 aaPredicted RBP10.24□□□□□ -0.77
LITAF-216ENST00000574848 SYTL2Q9HCH5 934 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 LHX9Q9NQ69 397 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 SNX15Q9NRS6 342 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 LNPEPQ9UIQ6 1025 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 CROTQ9UKG9 612 aa10.24□□□□□ -0.77
LITAF-216ENST00000574848 CORO1CQ9ULV4 474 aaPredicted RBP10.24□□□□□ -0.77
LITAF-216ENST00000574848 HMX2A2RU54 273 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 BTN3A3O00478 584 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 NKX2-8O15522 239 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 OR1I1O60431 355 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 CPNE3O75131 537 aaKnown RBP10.23□□□□□ -0.77
LITAF-216ENST00000574848 DCTN3O75935 186 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 TGDSO95455 350 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 STMN1P16949 149 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 POLR2CP19387 275 aaPredicted RBP10.23□□□□□ -0.77
LITAF-216ENST00000574848 CRABP2P29373 138 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 PRDX3P30048 256 aaKnown RBP10.23□□□□□ -0.77
LITAF-216ENST00000574848 SHMT2P34897 504 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 DLSTP36957 453 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 ARCN1P48444 511 aaKnown RBP10.23□□□□□ -0.77
LITAF-216ENST00000574848 PRKAA2P54646 552 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 POLE2P56282 527 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 ASPHQ12797 758 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 KRT33BQ14525 404 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 SEMA3AQ14563 771 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 TSNAXIP1Q2TAA8 658 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 ZNF789Q5FWF6 425 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 TMTC4Q5T4D3 741 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 ZNF470Q6ECI4 717 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 MRNIPQ6NTE8 343 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 NEPROQ6NW34 567 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 C6orf89Q6UWU4 347 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 FAM47EQ6ZV65 393 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 RAPH1Q70E73 1250 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 ZC3HC1Q86WB0 502 aaKnown RBP10.23□□□□□ -0.77
LITAF-216ENST00000574848 AMIGO1Q86WK6 493 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 TBC1D21Q8IYX1 336 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 SLC22A15Q8IZD6 547 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 ADGRF3Q8IZF5 1079 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 C2CD4AQ8NCU7 369 aaPredicted RBP10.23□□□□□ -0.77
LITAF-216ENST00000574848 ARMC2Q8NEN0 867 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 OR4E2Q8NGC2 313 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 OR5K2Q8NHB8 316 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 ELMO1Q92556 727 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 PPM1MQ96MI6 270 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 FERD3LQ96RJ6 166 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 SIKE1Q9BRV8 207 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 HGH1Q9BTY7 390 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 TRIM55Q9BYV6 548 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 CHRNA10Q9GZZ6 450 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 POLG2Q9UHN1 485 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 KCND3Q9UK17 655 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 PADI1Q9ULC6 663 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 ICKQ9UPZ9 632 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 CDYLQ9Y232 598 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 VPS9D1Q9Y2B5 631 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 RRP15Q9Y3B9 282 aaKnown RBP10.23□□□□□ -0.77
LITAF-216ENST00000574848 PCDHB3Q9Y5E6 796 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 PSAT1Q9Y617 370 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 USH1CQ9Y6N9 552 aa10.23□□□□□ -0.77
LITAF-216ENST00000574848 A0A087X1B8 175 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 A0A096LPK6 155 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 GSAPA4D1B5 854 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 WDR91A4D1P6 747 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 CCT8L1PA6NM43 557 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 C2orf74A8MZ97 194 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 GPC4O75487 556 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 BPGMP07738 259 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 TPBGLP0DKB5 382 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 ST6GAL1P15907 406 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 TCN2P20062 427 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 OGNP20774 298 aaKnown RBP10.22□□□□□ -0.77
LITAF-216ENST00000574848 CDH3P22223 829 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 RPS3P23396 243 aaKnown RBP eCLIP10.22□□□□□ -0.771e-8■□□□□ 9.8
LITAF-216ENST00000574848 GRK2P25098 689 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 ARNTP27540 789 aa10.22□□□□□ -0.77
LITAF-216ENST00000574848 CCR7P32248 378 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms