RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 SRPX2O60687 465 aaPredicted RBP16.67■□□□□ 0.26
SMG6-214ENST00000573827 SORBS2O94875 1100 aaKnown RBP16.67■□□□□ 0.26
SMG6-214ENST00000573827 SLC16A8O95907 504 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 MPC1LP0DKB6 136 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 TCP1P17987 556 aaKnown RBP16.67■□□□□ 0.26
SMG6-214ENST00000573827 PGAM1P18669 254 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 OTX2P32243 289 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 SKIV2L2P42285 1042 aaKnown RBP16.67■□□□□ 0.26
SMG6-214ENST00000573827 PGDP52209 483 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 ARSFP54793 590 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 TAP2Q03519 686 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 DHX9Q08211 1270 aaKnown RBP16.67■□□□□ 0.26
SMG6-214ENST00000573827 PRTGQ2VWP7 1150 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 TCTE1Q5JU00 501 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 YOD1Q5VVQ6 348 aaPredicted RBP16.67■□□□□ 0.26
SMG6-214ENST00000573827 ZNF425Q6IV72 752 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 OVCH1Q7RTY7 1134 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 PAQR7Q86WK9 346 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 RAB43Q86YS6 212 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 CNTN4Q8IWV2 1026 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 ARHGEF39Q8N4T4 335 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.67■□□□□ 0.26
SMG6-214ENST00000573827 C2CD4AQ8NCU7 369 aaPredicted RBP16.67■□□□□ 0.26
SMG6-214ENST00000573827 SMPDL3AQ92484 453 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 INPP5DQ92835 1189 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 FKBP10Q96AY3 582 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 EBNA1BP2Q99848 306 aaKnown RBP16.67■□□□□ 0.26
SMG6-214ENST00000573827 SELENOSQ9BQE4 189 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 AARSD1Q9BTE6 412 aaKnown RBP16.67■□□□□ 0.26
SMG6-214ENST00000573827 TXLNGQ9NUQ3 528 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 PLAAQ9Y263 795 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 MDC1Q14676 2089 aaKnown RBP16.66■□□□□ 0.26
SMG6-214ENST00000573827 VSTM2BA6NLU5 285 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 E5RI56 91 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 MASP2O00187 686 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 ENO3P13929 434 aaPredicted RBP16.66■□□□□ 0.26
SMG6-214ENST00000573827 FOLR3P41439 243 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 SOX8P57073 446 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 VSX2P58304 361 aaPredicted RBP16.66■□□□□ 0.26
SMG6-214ENST00000573827 SRSF1Q07955 248 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMG6-214ENST00000573827 GRM7Q14831 915 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 PPP1R7Q15435 360 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 NKG7Q16617 165 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 NADK2Q4G0N4 442 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 DOPEY1Q5JWR5 2465 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 DCAF10Q5QP82 559 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 WASHC2DQ5SRD0 308 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 SUSD1Q6UWL2 747 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 PIWIL4Q7Z3Z4 852 aaKnown RBP16.66■□□□□ 0.26
SMG6-214ENST00000573827 KCNMB4Q86W47 210 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 RAB42Q8N4Z0 105 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 TEX19Q8NA77 164 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 Q8NA96 180 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 PTERQ96BW5 349 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 C10orf90Q96M02 699 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 PWWP2AQ96N64 755 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 SMAD5Q99717 465 aaKnown RBP16.66■□□□□ 0.26
SMG6-214ENST00000573827 PLCD4Q9BRC7 762 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 DPH7Q9BTV6 452 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 ACAT2Q9BWD1 397 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 WDR54Q9H977 334 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 FAM114A2Q9NRY5 505 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 IARS2Q9NSE4 1012 aaKnown RBP16.66■□□□□ 0.26
SMG6-214ENST00000573827 P4HTMQ9NXG6 502 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 PYCARDQ9ULZ3 195 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 PCDHGB7Q9Y5F8 929 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 COMMD10Q9Y6G5 202 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 POLEQ07864 2286 aa16.66■□□□□ 0.26
SMG6-214ENST00000573827 CENPEQ02224 2701 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 A0A0J9YVX5 310 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 ALBP02768 609 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 CATP04040 527 aaKnown RBP16.65■□□□□ 0.26
SMG6-214ENST00000573827 CD63P08962 238 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 ERVK-10P10266 1014 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 ALAS2P22557 587 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 PNLIPRP1P54315 467 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 MLLT10P55197 1068 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 PRDX1Q06830 199 aaKnown RBP16.65■□□□□ 0.26
SMG6-214ENST00000573827 TTLL9Q3SXZ7 439 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 CPNE9Q8IYJ1 553 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 RBMXL3Q8N7X1 1067 aaKnown RBP16.65■□□□□ 0.26
SMG6-214ENST00000573827 CALML6Q8TD86 181 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 IP6K3Q96PC2 410 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 FAM167BQ9BTA0 163 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 IRAK4Q9NWZ3 460 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 ANKMY1Q9P2S6 941 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 SLC17A6Q9P2U8 582 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 CTSFQ9UBX1 484 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 NDOR1Q9UHB4 597 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 ASIC3Q9UHC3 531 aa16.65■□□□□ 0.26
SMG6-214ENST00000573827 UNC79Q9P2D8 2635 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 H0YGG7 62 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 EIF3FO00303 357 aaPredicted RBP16.64■□□□□ 0.25
SMG6-214ENST00000573827 TSPAN12O95859 305 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 IMPA1P29218 277 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 HSD17B2P37059 387 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 OR1D4P47884 311 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 RRADP55042 308 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 CDKN2DP55273 166 aa16.64■□□□□ 0.25
SMG6-214ENST00000573827 ARF3P61204 181 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms