RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 FBXO42Q6P3S6 717 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 PDIK1LQ8N165 341 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 FDCSPQ8NFU4 85 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 OR2Y1Q8NGV0 311 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 ZNF480Q8WV37 535 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 ASB11Q8WXH4 323 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 MIB2Q96AX9 1013 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 C10orf90Q96M02 699 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 GPR21Q99679 349 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 C17orf62Q9BQA9 187 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 AARSD1Q9BTE6 412 aaKnown RBP16.57■□□□□ 0.24
SMG6-212ENST00000573153 A0A1B0GX78 115 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 E7ENX8 843 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 DSCR3O14972 297 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 SORBS2O94875 1100 aaKnown RBP16.56■□□□□ 0.24
SMG6-212ENST00000573153 SEC31AO94979 1220 aaKnown RBP16.56■□□□□ 0.24
SMG6-212ENST00000573153 SLC16A8O95907 504 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 CATP04040 527 aaKnown RBP16.56■□□□□ 0.24
SMG6-212ENST00000573153 AGXTP21549 392 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 HSD17B2P37059 387 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 SKIV2L2P42285 1042 aaKnown RBP16.56■□□□□ 0.24
SMG6-212ENST00000573153 CD97P48960 835 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 CCL11P51671 97 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 TAP2Q03519 686 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 KCNC4Q03721 635 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 NAA25Q14CX7 972 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 ZXDCQ2QGD7 858 aaPredicted RBP16.56■□□□□ 0.24
SMG6-212ENST00000573153 PRTGQ2VWP7 1150 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 STEAP4Q687X5 459 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 SUSD1Q6UWL2 747 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 PIWIL4Q7Z3Z4 852 aaKnown RBP16.56■□□□□ 0.24
SMG6-212ENST00000573153 PAQR7Q86WK9 346 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 KLHL7Q8IXQ5 586 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 CPNE9Q8IYJ1 553 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 Q8NA96 180 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 N4BP2L2Q92802 583 aaPredicted RBP16.56■□□□□ 0.24
SMG6-212ENST00000573153 INPP5DQ92835 1189 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 FKBP10Q96AY3 582 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 MESP1Q9BRJ9 268 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 SLC26A1Q9H2B4 701 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 IARS2Q9NSE4 1012 aaKnown RBP16.56■□□□□ 0.24
SMG6-212ENST00000573153 CUTCQ9NTM9 273 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 TEX264Q9Y6I9 313 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 NBASA2RRP1 2371 aa16.56■□□□□ 0.24
SMG6-212ENST00000573153 FLNCQ14315 2725 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 CYSRT1A8MQ03 144 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 C9J4A7 227 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 TTI1O43156 1089 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 TSPAN12O95859 305 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 ERVK-10P10266 1014 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 IMPA1P29218 277 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 SSPNQ14714 243 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 NADK2Q4G0N4 442 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 ZC3H12BQ5HYM0 836 aaKnown RBP16.55■□□□□ 0.24
SMG6-212ENST00000573153 RBM20Q5T481 1227 aaKnown RBP16.55■□□□□ 0.24
SMG6-212ENST00000573153 YOD1Q5VVQ6 348 aaPredicted RBP16.55■□□□□ 0.24
SMG6-212ENST00000573153 MLIPQ5VWP3 458 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 LRRC8EQ6NSJ5 796 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 TTLL10Q6ZVT0 673 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 TMEM102Q8N9M5 508 aaPredicted RBP16.55■□□□□ 0.24
SMG6-212ENST00000573153 PPFIBP2Q8ND30 876 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 CERS2Q96G23 380 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 SNF8Q96H20 258 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 SMAD5Q99717 465 aaKnown RBP16.55■□□□□ 0.24
SMG6-212ENST00000573153 NDC1Q9BTX1 674 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 SLC25A23Q9BV35 468 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 ACSS2Q9NR19 701 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.55■□□□□ 0.24
SMG6-212ENST00000573153 IFT80Q9P2H3 777 aaPredicted RBP16.55■□□□□ 0.24
SMG6-212ENST00000573153 CTSFQ9UBX1 484 aa16.55■□□□□ 0.24
SMG6-212ENST00000573153 PTRH2Q9Y3E5 179 aaKnown RBP16.55■□□□□ 0.24
SMG6-212ENST00000573153 VSTM2BA6NLU5 285 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 ZNF839A8K0R7 811 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 E7ESA3 106 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 NDC80O14777 642 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 VPS26AO75436 327 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 CD63P08962 238 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 PGGT1BP53609 377 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 ITGA8P53708 1063 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 PNLIPRP1P54315 467 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 NKG7Q16617 165 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 HIF1AQ16665 826 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 BBS9Q3SYG4 887 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 TCTE1Q5JU00 501 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 DCAF10Q5QP82 559 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 WASHC2DQ5SRD0 308 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 UGT3A1Q6NUS8 523 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 TRMT10BQ6PF06 316 aaKnown RBP16.54■□□□□ 0.24
SMG6-212ENST00000573153 MED25Q71SY5 747 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 OVCH1Q7RTY7 1134 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 RBMXL3Q8N7X1 1067 aaKnown RBP16.54■□□□□ 0.24
SMG6-212ENST00000573153 SMPDL3AQ92484 453 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 NDNQ99608 321 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 SELENOSQ9BQE4 189 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 PLCD4Q9BRC7 762 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 TRIM51Q9BSJ1 452 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 DPH7Q9BTV6 452 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 ACAT2Q9BWD1 397 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 SLC7A5P2Q9GIP4 190 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 TXLNGQ9NUQ3 528 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms