RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 DPM1O60762 260 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 CTSVO60911 334 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 PSIP1O75475 530 aaKnown RBP11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 ALPPP05187 535 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 ERVK-10P10266 1014 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 MCM3P25205 808 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 RPA3P35244 121 aaPredicted RBP11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 HSD17B2P37059 387 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 SLC1A2P43004 574 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 MAGEA3P43357 314 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 GCGRP47871 477 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 CLCN7P51798 805 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 VSX2P58304 361 aaPredicted RBP11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 CTBP1Q13363 440 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 TSTA3Q13630 321 aaPredicted RBP11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 RAPSNQ13702 412 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 HPS6Q86YV9 775 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 DENND6AQ8IWF6 608 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 REXO1L1PQ8IX06 675 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 PPIL6Q8IXY8 311 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 NAT8LQ8N9F0 302 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 OR2A1Q8NGT9 310 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 CALML6Q8TD86 181 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 SMPDL3AQ92484 453 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 KCNJ9Q92806 393 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 MIB2Q96AX9 1013 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 FAM167BQ9BTA0 163 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 NUDT9Q9BW91 350 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 ACAT2Q9BWD1 397 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 P4HTMQ9NXG6 502 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 GALPQ9UBC7 116 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 ASIC3Q9UHC3 531 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 NXT1Q9UKK6 140 aaKnown RBP11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 NEU2Q9Y3R4 380 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 KLK4Q9Y5K2 254 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 SPTBP11277 2137 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 RELNP78509 3460 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 A0A0J9YVX5 310 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 A0A1W2PPV9 198 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 MYO1CO00159 1063 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 CES2O00748 559 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 SRPX2O60687 465 aaPredicted RBP11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 CNOT3O75175 753 aaKnown RBP11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 VPS26AO75436 327 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 UMODP07911 640 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 F7P08709 466 aaPredicted RBP11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 ERGP11308 486 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 ENO3P13929 434 aaPredicted RBP11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 FOXL2P58012 376 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 CUL1Q13616 776 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 FASTKQ14296 549 aaKnown RBP11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 ARHGAP19Q14CB8 494 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 FAM214AQ32MH5 1076 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 NADK2Q4G0N4 442 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 DCAF10Q5QP82 559 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 WASHC2DQ5SRD0 308 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 VWA5B1Q5TIE3 1220 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 NEK10Q6ZWH5 1172 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 RNF44Q7L0R7 432 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 GIMAP7Q8NHV1 300 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 ZNF285Q96NJ3 590 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 ZFYVE21Q9BQ24 234 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 DPH7Q9BTV6 452 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 WDR54Q9H977 334 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 MRPS30Q9NP92 439 aaKnown RBP11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 ENAMQ9NRM1 1142 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 SLC22A11Q9NSA0 550 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 TRMT1Q9NXH9 659 aaKnown RBP11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 KLHL42Q9P2K6 505 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 CDC23Q9UJX2 597 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 FBXO5Q9UKT4 447 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 COMMD10Q9Y6G5 202 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 PTPN13Q12923 2485 aa11.83□□□□□ -0.52
CTDNEP1-205ENST00000570828 LOC100996750A0A140TA64 210 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 OR2A25A4D2G3 310 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 FITM1A5D6W6 292 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 NRP2O60462 931 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 KLHL41O60662 606 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 VPS4BO75351 444 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 CCNDBP1O95273 360 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 SYF2O95926 243 aaKnown RBP11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 ALBP02768 609 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 EIF2S1P05198 315 aaKnown RBP11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 PGAM1P18669 254 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 ITGAXP20702 1163 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 CD97P48960 835 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 PNLIPRP1P54315 467 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 PTK6Q13882 451 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 NKG7Q16617 165 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 HSP90AA5PQ58FG0 334 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 RNASEH2BQ5TBB1 312 aaKnown RBP11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 FRMPD2BQ6IN97 320 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 SUSD1Q6UWL2 747 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 OVCH1Q7RTY7 1134 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 PPP1R32Q7Z5V6 425 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 KCNMB4Q86W47 210 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 AGGF1Q8N302 714 aaeCLIP11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 GALNT16Q8N428 558 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms