RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SLC7A9P82251 487 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 ILKQ13418 452 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 RSPO4Q2I0M5 234 aaPredicted RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 ABHD17CQ6PCB6 329 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 C4orf22Q6V702 233 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 USP45Q70EL2 814 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 UBE2R2Q712K3 238 aaPredicted RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 ZNF572Q7Z3I7 529 aaPredicted RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 TMPRSS6Q8IU80 811 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 TICAM1Q8IUC6 712 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 TERB1Q8NA31 727 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 MINDY2Q8NBR6 621 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 TXNDC5Q8NBS9 432 aaKnown RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 RPLP0P6Q8NHW5 317 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 AGPAT1Q99943 283 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 EPB41L1Q9H4G0 881 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 PCMTD2Q9NV79 361 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 FBXL12Q9NXK8 326 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 ADAM22Q9P0K1 906 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 HRH3Q9Y5N1 445 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 NCANO14594 1321 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 TCRBV7S2A1N4TA0A589 114 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 DBX1A6NMT0 343 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 ATP6V1G2-DDX39BF2Z307 99 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 CLOCKO15516 846 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 TNFP01375 233 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 CEBPBP17676 345 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 NDST1P52848 882 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 NME3Q13232 169 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 FAM153CQ494X1 144 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 ZRANB3Q5FWF4 1079 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 FAM78AQ5JUQ0 283 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 UBAP2Q5T6F2 1119 aaKnown RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 STPG1Q5TH74 334 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 PYHIN1Q6K0P9 492 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 PTAR1Q7Z6K3 402 aaPredicted RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 TIGD4Q8IY51 512 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 GPR135Q8IZ08 494 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 MCOLN3Q8TDD5 553 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 ZCCHC14Q8WYQ9 949 aaKnown RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 MSLNLQ96KJ4 702 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 MAGEB10Q96LZ2 347 aaPredicted RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 COG4Q9H9E3 785 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 POPDC2Q9HBU9 364 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 CNOT8Q9UFF9 292 aaKnown RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 CYP8B1Q9UNU6 501 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 MRPS2Q9Y399 296 aaKnown RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 OR6C76A6NM76 312 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 ALOX15BO15296 676 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 CACNG3O60359 315 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 FTLP02792 175 aaPredicted RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 GPC1P35052 558 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 CD79BP40259 229 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 PXNP49023 591 aaPredicted RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 NPY4RP50391 375 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 SRSF2Q01130 221 aaKnown RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 BCL2L1Q07817 233 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 FAM182AQ5T1J6 154 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 SEL1L2Q5TEA6 688 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 ZNF385CQ66K41 422 aaPredicted RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 HFE2Q6ZVN8 426 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 ZCCHC7Q8N3Z6 543 aaKnown RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 IL22RA1Q8N6P7 574 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 SLC2A14Q8TDB8 520 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 MVB12AQ96EY5 273 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 TSPAN17Q96FV3 270 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 PDLIM5Q96HC4 596 aaKnown RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 CCM2Q9BSQ5 444 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 SPATA16Q9BXB7 569 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 CNIH4Q9P003 139 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 CTTNBP2NLQ9P2B4 639 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 CHRNA9Q9UGM1 479 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 TMEM59LQ9UK28 342 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 TSPAN16Q9UKR8 245 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 SNX7Q9UNH6 387 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 PCDHB14Q9Y5E9 798 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 TARM1B6A8C7 271 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 C3orf80F5H4A9 247 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 SLC16A6O15403 523 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 NUPL2O15504 423 aaKnown RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 OR8G3PP0DMU2 310 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 CYP11B1P15538 503 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 HNF1AP20823 631 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 UGT1A1P22309 533 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 GARSP41250 739 aaKnown RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 SLC9A3P48764 834 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 DYRK1AQ13627 763 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 PIGHQ14442 188 aaPredicted RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 FLYWCH1Q4VC44 716 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 IFI44LQ53G44 452 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 XKR4Q5GH76 650 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 PRAMEF14Q5SWL7 426 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 SMG8Q8ND04 991 aaKnown RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 OR52E1Q8NGJ3 308 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 ERLEC1Q96DZ1 483 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 SEC22CQ9BRL7 303 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 GPR174Q9BXC1 333 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 KCNK13Q9HB14 408 aa6.48□□□□□ -1.37
SMG1-217ENST00000569764 CACYBPQ9HB71 228 aaKnown RBP6.48□□□□□ -1.37
SMG1-217ENST00000569764 NOD2Q9HC29 1040 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms