RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 OTUD6BQ8N6M0 293 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 SKA2Q8WVK7 121 aaPredicted RBP13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 DLG3Q92796 817 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 SLC22A18Q96BI1 424 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 FER1L6-AS2Q96M78 137 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 IP6K3Q96PC2 410 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 ACAT2Q9BWD1 397 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 WDR54Q9H977 334 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 SLAMF7Q9NQ25 335 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 CROCCQ5TZA2 2017 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 CACNA1DQ01668 2161 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 LRBAP50851 2863 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 SCN3AQ9NY46 2000 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 ZCWPW2A0A1B0GU75 182 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 TARM1B6A8C7 271 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 MYO1CO00159 1063 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 PEX12O00623 359 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 FFAR3O14843 346 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 GPR42O15529 346 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 PSIP1O75475 530 aaKnown RBP13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 AGFG2O95081 481 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 ESR1P03372 595 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 OGNP20774 298 aaKnown RBP13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 ATP5DP30049 168 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 PPARGP37231 505 aaPredicted RBP13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 ARSFP54793 590 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 GPS1Q13098 491 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 GRM7Q14831 915 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 HIF1AQ16665 826 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 PRTGQ2VWP7 1150 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 KLHL38Q2WGJ6 581 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 Q6ZS92 163 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 CILP2Q8IUL8 1156 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 DENND6AQ8IWF6 608 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 RASGEF1CQ8N431 466 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 ZUFSPQ96AP4 578 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 PKP4Q99569 1192 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 BARD1Q99728 777 aaKnown RBP13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 DPH7Q9BTV6 452 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 RAB11FIP5Q9BXF6 653 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 INTS7Q9NVH2 962 aaKnown RBP13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 SPATA7Q9P0W8 599 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 CDC23Q9UJX2 597 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 B3GNT3Q9Y2A9 372 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 PCDHGA10Q9Y5H3 936 aa13.22□□□□□ -0.29
GTF3C1-211ENST00000569653 HYKKA2RU49 373 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 GOLGA8MH3BSY2 632 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 PGRMC1O00264 195 aaKnown RBP13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 CBX6O95503 412 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 KRT14P02533 472 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 ALBP02768 609 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 PKMP14618 531 aaKnown RBP13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 MAGEA3P43357 314 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 ADARP55265 1226 aaKnown RBP13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 CDK16Q00536 496 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 CUL1Q13616 776 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 NR6A1Q15406 480 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 ANKRD20A4Q4UJ75 823 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 ZC3H12BQ5HYM0 836 aaKnown RBP13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 TCTE1Q5JU00 501 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 FHL5Q5TD97 284 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 YOD1Q5VVQ6 348 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 ZNF470Q6ECI4 717 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 ZNF425Q6IV72 752 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 MRNIPQ6NTE8 343 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 NEPROQ6NW34 567 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 LAPTM4BQ86VI4 370 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 PAQR7Q86WK9 346 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 HPS6Q86YV9 775 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 LRRC56Q8IYG6 542 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 PRSS58Q8IYP2 241 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 CLEC1AQ8NC01 280 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 PPFIBP2Q8ND30 876 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 OR11G2Q8NGC1 345 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 OR9A1PQ8NGU1 263 aa13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 ZNF669Q96BR6 464 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 FBXO6Q9NRD1 293 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 ZC3H7BQ9UGR2 993 aaKnown RBP13.21□□□□□ -0.29
GTF3C1-211ENST00000569653 SCN2AQ99250 2005 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 GOLGA6L10A0A0M3HER8 536 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 H0YGG7 62 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 CES2O00748 559 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 KPNA5O15131 536 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 P2RX6O15547 441 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 FKBP9O95302 570 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 CCNFP41002 786 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 SLC1A2P43004 574 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 ARF3P61204 181 aaPredicted RBP13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 MPP1Q00013 466 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 TIAL1Q01085 375 aaKnown RBP eCLIP13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 KLC1Q07866 573 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 AIMP2Q13155 320 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 CTBP1Q13363 440 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 HKDC1Q2TB90 917 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 PRAMEF13Q5VWM6 474 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 IGFL2Q6UWQ7 119 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 CYHR1Q6ZMK1 362 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 PARP9Q8IXQ6 854 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 STT3BQ8TCJ2 826 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 SSC4DQ8WTU2 575 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms