RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 HPS6Q86YV9 775 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 EID3Q8N140 333 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 SLC22A18Q96BI1 424 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 SEPHS2Q99611 448 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 URM1Q9BTM9 101 aaKnown RBP2.66□□□□□ -1.98
UBR1-209ENST00000569243 SHARPINQ9H0F6 387 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 Q9N2K0 584 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 FAM207AQ9NSI2 230 aaPredicted RBP2.66□□□□□ -1.98
UBR1-209ENST00000569243 HAUS2Q9NVX0 235 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 NSMCE4AQ9NXX6 385 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 GDE1Q9NZC3 331 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 CRNNQ9UBG3 495 aaPredicted RBP2.66□□□□□ -1.98
UBR1-209ENST00000569243 TSPAN16Q9UKR8 245 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 ABT1Q9ULW3 272 aaKnown RBP2.66□□□□□ -1.98
UBR1-209ENST00000569243 PTRH2Q9Y3E5 179 aaKnown RBP2.66□□□□□ -1.98
UBR1-209ENST00000569243 WIPI2Q9Y4P8 454 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 A0A1W2PPQ1 181 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 ANKRD18BA2A2Z9 1011 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 SRRM5B3KS81 715 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 TFECO14948 347 aaPredicted RBP2.65□□□□□ -1.99
UBR1-209ENST00000569243 IGHV2-70P01814 119 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 THEGLP0DJG4 465 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 IL4RP24394 825 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 CSTF2P33240 577 aaKnown RBP eCLIP2.65□□□□□ -1.99
UBR1-209ENST00000569243 MTHFRP42898 656 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 GEMIN4P57678 1058 aaKnown RBP2.65□□□□□ -1.99
UBR1-209ENST00000569243 CSNK2BP67870 215 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 CUL4AQ13619 759 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 ITGA7Q13683 1181 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 PHLDA2Q53GA4 152 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 XKR3Q5GH77 459 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 SLC25A53Q5H9E4 307 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 HYIQ5T013 277 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 UGT3A1Q6NUS8 523 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 RTN4RL2Q86UN3 420 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 ZFAND4Q86XD8 727 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 MAML2Q8IZL2 1156 aaPredicted RBP2.65□□□□□ -1.99
UBR1-209ENST00000569243 CDK20Q8IZL9 346 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 C17orf53Q8N3J3 647 aaPredicted RBP2.65□□□□□ -1.99
UBR1-209ENST00000569243 TSPAN14Q8NG11 270 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 TOMM40LQ969M1 308 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 EVI5LQ96CN4 794 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 SPDL1Q96EA4 605 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 RSRC1Q96IZ7 334 aaKnown RBP2.65□□□□□ -1.99
UBR1-209ENST00000569243 FAM20AQ96MK3 541 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 SFXN2Q96NB2 322 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 LGMNQ99538 433 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 TBC1D17Q9HA65 648 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.65□□□□□ -1.99
UBR1-209ENST00000569243 CTSZQ9UBR2 303 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 C19orf25Q9UFG5 118 aaPredicted RBP2.65□□□□□ -1.99
UBR1-209ENST00000569243 TBC1D29Q9UFV1 150 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 DDX25Q9UHL0 483 aaKnown RBP2.65□□□□□ -1.99
UBR1-209ENST00000569243 TMEM5Q9Y2B1 443 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 PPP2R2CQ9Y2T4 447 aa2.65□□□□□ -1.99
UBR1-209ENST00000569243 COL16A1Q07092 1604 aaPredicted RBP2.64□□□□□ -1.99
UBR1-209ENST00000569243 A0A1W2PR80 420 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 ARPC2O15144 300 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 IGHEP01854 428 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 LINGO3P0C6S8 592 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 FOLR2P14207 255 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 PTGER4P35408 488 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 RPL21P46778 160 aaKnown RBP2.64□□□□□ -1.99
UBR1-209ENST00000569243 ZNF75DP51815 510 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 ZNF415Q09FC8 603 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 HSPB3Q12988 150 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 IGSF11Q5DX21 431 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 FAM166AQ6J272 317 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 RAPH1Q70E73 1250 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 ZNF595Q8IYB9 648 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 TAGAPQ8N103 731 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 ABHD12Q8N2K0 398 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 METTL4Q8N3J2 472 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 NPRL2Q8WTW4 380 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 APOBEC4Q8WW27 367 aaKnown RBP2.64□□□□□ -1.99
UBR1-209ENST00000569243 TMCO6Q96DC7 493 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 CALML4Q96GE6 196 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 TUBB1Q9H4B7 451 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 ANKZF1Q9H8Y5 726 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 SLC35C2Q9NQQ7 365 aa2.64□□□□□ -1.99
UBR1-209ENST00000569243 RSF1Q96T23 1441 aaPredicted RBP2.64□□□□□ -1.99
UBR1-209ENST00000569243 GON4LQ3T8J9 2241 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 NEMP2A6NFY4 417 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 SHISA7A6NL88 538 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 C2CD4DB7Z1M9 353 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 PHOX2AO14813 284 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 IPO8O15397 1037 aaKnown RBP2.63□□□□□ -1.99
UBR1-209ENST00000569243 BCL10O95999 233 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 HOXD4P09016 255 aaPredicted RBP2.63□□□□□ -1.99
UBR1-209ENST00000569243 RAB40ALP0C0E4 278 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 PFKFB1P16118 471 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 PORP16435 677 aaPredicted RBP2.63□□□□□ -1.99
UBR1-209ENST00000569243 LHCGRP22888 699 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 EIF2DP41214 584 aaKnown RBP2.63□□□□□ -1.99
UBR1-209ENST00000569243 CDH13P55290 713 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 UBXN2AP68543 259 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 SIM2Q14190 667 aaPredicted RBP2.63□□□□□ -1.99
UBR1-209ENST00000569243 SQLEQ14534 574 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 SNAPC1Q16533 368 aa2.63□□□□□ -1.99
UBR1-209ENST00000569243 ZNF74Q16587 644 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms