RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 FRMPD2BQ6IN97 320 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 UNC5DQ6UXZ4 953 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 VRK3Q8IV63 474 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 CFAP61Q8NHU2 1237 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 ADAMTS18Q8TE60 1221 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 THAP3Q8WTV1 239 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 ASZ1Q8WWH4 475 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 C10orf90Q96M02 699 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 TTC1Q99614 292 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 TSSK1BQ9BXA7 367 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 GOLPH3Q9H4A6 298 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 GPAMQ9HCL2 828 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 C14orf105Q9NVL8 296 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 IFNKQ9P0W0 207 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 TRPC4Q9UBN4 977 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 ZC3H7BQ9UGR2 993 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 INTUQ9ULD6 942 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 CDC14AQ9UNH5 594 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 KLK4Q9Y5K2 254 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 ALG6Q9Y672 507 aa11.23□□□□□ -0.61
GTF3C1-209ENST00000568569 LOC102723996A0A087X1L8 192 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 A0A0J9YVX5 310 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 OR51F1A6NGY5 319 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 GOLGA6L19H0YKK7 550 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 FANCGO15287 622 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 DIAPH2O60879 1101 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 ZNF189O75820 626 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 EIF2S1P05198 315 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 TPM3P06753 285 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 HEXBP07686 556 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 RBP3P10745 1247 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 ITGAMP11215 1152 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 CD1EP15812 388 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 TPH1P17752 444 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 PSMA3P25788 255 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 CCR7P32248 378 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 EIF3EP60228 445 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 ZNF33BQ06732 778 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 TRIM14Q14142 442 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 ZNF766Q5HY98 468 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 KCTD11Q693B1 232 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 TTC23LQ6PF05 361 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 DARS2Q6PI48 645 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 Q6ZPB1 254 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 NEK10Q6ZWH5 1172 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 RNF44Q7L0R7 432 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 SPPL2CQ8IUH8 684 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 OR2L3Q8NG85 312 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 MVB12AQ96EY5 273 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 CABS1Q96KC9 395 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 GPR137Q96N19 417 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 CHP1Q99653 195 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 YIPF2Q9BWQ6 316 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 ZNF700Q9H0M5 742 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 LRRC40Q9H9A6 602 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 NHEJ1Q9H9Q4 299 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 STMN3Q9NZ72 180 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 ZNF835Q9Y2P0 537 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 MEMO1Q9Y316 297 aa11.22□□□□□ -0.61
GTF3C1-209ENST00000568569 LOC105369274A0A096LPK9 316 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 LOC102723532A0A0G2JNH3 316 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 CCDC162PA2VCL2 907 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 MROH6A6NGR9 719 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 PJA2O43164 708 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 OR1I1O60431 355 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 GPC4O75487 556 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 APOA4P06727 396 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 PSMB5P28074 263 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 EMP3P54852 163 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 HADHBP55084 474 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 COPS2P61201 443 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 NAA25Q14CX7 972 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 PCOLCEQ15113 449 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 PRTGQ2VWP7 1150 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 KRTCAP3Q53RY4 240 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 OR4N4Q8N0Y3 316 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 RAB42Q8N4Z0 105 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 ACBD4Q8NC06 268 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 KRT35Q92764 455 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 RAD51AP1Q96B01 352 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 MIPEPQ99797 713 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 ZFYVE21Q9BQ24 234 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 TGIF2Q9GZN2 237 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 ENKD1Q9H0I2 346 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 MKKSQ9NPJ1 570 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 ABHD10Q9NUJ1 306 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 STOX2Q9P2F5 926 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 EFR3BQ9Y2G0 817 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 PCDHGB6Q9Y5F9 930 aa11.21□□□□□ -0.61
GTF3C1-209ENST00000568569 NCOA6Q14686 2063 aaPredicted RBP11.21□□□□□ -0.62
GTF3C1-209ENST00000568569 CACNA1CQ13936 2221 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 FAM227AF5H4B4 570 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 FFAR3O14843 346 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 GPR42O15529 346 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 TTI1O43156 1089 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 NRP2O60462 931 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 VPS26AO75436 327 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 WISP2O76076 250 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms