RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 LCTLQ6UWM7 567 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 HDXQ7Z353 690 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 EXOC3L1Q86VI1 746 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 KMT5CQ86Y97 462 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 D2HGDHQ8N465 521 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 BMPERQ8N8U9 685 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 C19orf47Q8N9M1 422 aaKnown RBP17.32■□□□□ 0.36
COMMD4-222ENST00000568034 PRR11Q96HE9 360 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-222ENST00000568034 APOPT1Q96IL0 206 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 SCNM1Q9BWG6 230 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 STRADBQ9C0K7 418 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 C12orf65Q9H3J6 166 aaKnown RBP17.32■□□□□ 0.36
COMMD4-222ENST00000568034 TMBIM4Q9HC24 238 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 FAM60AQ9NP50 221 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 ABCF3Q9NUQ8 709 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 CUEDC1Q9NWM3 386 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-222ENST00000568034 OCIAD1Q9NX40 245 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 WWOXQ9NZC7 414 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 LOXL2Q9Y4K0 774 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 COPEO14579 308 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 PLIN3O60664 434 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 IPO13O94829 963 aaKnown RBP17.31■□□□□ 0.36
COMMD4-222ENST00000568034 PROCP04070 461 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 CCL4P13236 92 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 SH3BP2P78314 561 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 ZNF425Q6IV72 752 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 RAB11FIP2Q7L804 512 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 ERMP1Q7Z2K6 904 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 THOC6Q86W42 341 aaKnown RBP17.31■□□□□ 0.36
COMMD4-222ENST00000568034 FBXO39Q8N4B4 442 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 PTGR2Q8N8N7 351 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-222ENST00000568034 AGBL5Q8NDL9 886 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 ALKBH8Q96BT7 664 aaKnown RBP17.31■□□□□ 0.36
COMMD4-222ENST00000568034 CHRNA10Q9GZZ6 450 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 PCBD2Q9H0N5 130 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 VIPAS39Q9H9C1 493 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 ZNF446Q9NWS9 450 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 SENP1Q9P0U3 644 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 SLC22A14Q9Y267 594 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 HEATR5BQ9P2D3 2071 aa17.31■□□□□ 0.36
COMMD4-222ENST00000568034 MED19A0JLT2 244 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-222ENST00000568034 OR2A25A4D2G3 310 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 LRRC14BA6NHZ5 514 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 A8MT66 165 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 HCRTR1O43613 425 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 TYROBPO43914 113 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 SPAG7O75391 227 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 WDR47O94967 919 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 CCNDBP1O95273 360 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 S100BP04271 92 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-222ENST00000568034 MYZAPP0CAP1 466 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 GFAPP14136 432 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 EPORP19235 508 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 CMPK1P30085 196 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 CSTF2P33240 577 aaKnown RBP eCLIP17.3■□□□□ 0.36
COMMD4-222ENST00000568034 ETV5P41161 510 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 GABRA4P48169 554 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 CCT5P48643 541 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 ALDH18A1P54886 795 aaKnown RBP17.3■□□□□ 0.36
COMMD4-222ENST00000568034 ABATP80404 500 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 EIF3IQ13347 325 aaKnown RBP17.3■□□□□ 0.36
COMMD4-222ENST00000568034 KCNAB1Q14722 419 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 PFKFB4Q16877 469 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 THEMIS2Q5TEJ8 643 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 FIGLAQ6QHK4 219 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 CMKLR1Q99788 373 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 CD244Q9BZW8 370 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 CENPHQ9H3R5 247 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 SYNPO2LQ9H987 977 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 MRPS30Q9NP92 439 aaKnown RBP17.3■□□□□ 0.36
COMMD4-222ENST00000568034 GRID1Q9ULK0 1009 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 SATB2Q9UPW6 733 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 PLLPQ9Y342 182 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 NEUROG3Q9Y4Z2 214 aa17.3■□□□□ 0.36
COMMD4-222ENST00000568034 EFCAB7A8K855 629 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 G3V2L1 256 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 STX16-NPEPL1H3BU86 382 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 STX16O14662 325 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 DLX3O60479 287 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 STK16O75716 305 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 SIX3O95343 332 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-222ENST00000568034 EBLN1P0CF75 366 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 FGF3P11487 239 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-222ENST00000568034 FOLR1P15328 257 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 ITIH1P19827 911 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 HSD11B2P80365 405 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 NFKB2Q00653 900 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 PCBP2Q15366 365 aaKnown RBP eCLIP17.29■□□□□ 0.361e-11■■■■■ 48
COMMD4-222ENST00000568034 C3orf38Q5JPI3 329 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 LRRC70Q7Z2Q7 622 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 PAQR7Q86WK9 346 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 C17orf64Q86WR6 236 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 DNAJC22Q8N4W6 341 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 WDR36Q8NI36 951 aaKnown RBP17.29■□□□□ 0.36
COMMD4-222ENST00000568034 NEIL2Q969S2 332 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 PMEPA1Q969W9 287 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 ZUFSPQ96AP4 578 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 TLCD1Q96CP7 247 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 SMC6Q96SB8 1091 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 RUFY1Q96T51 708 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms