RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ANP32BQ92688 251 aaKnown RBP4.59□□□□□ -1.67
CLK3-219ENST00000567805 FKBP10Q96AY3 582 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 NACC2Q96BF6 587 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 FAM136AQ96C01 138 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 SIGLEC10Q96LC7 697 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 FER1L6-AS2Q96M78 137 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 ZNF285Q96NJ3 590 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 RUNDC3BQ96NL0 473 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 IL17FQ96PD4 163 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 MIPEPQ99797 713 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 TRIM56Q9BRZ2 755 aaKnown RBP4.59□□□□□ -1.67
CLK3-219ENST00000567805 FAM167BQ9BTA0 163 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 NAT9Q9BTE0 207 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 SLC25A23Q9BV35 468 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 KCNF1Q9H3M0 494 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 WDR54Q9H977 334 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 MLXIPLQ9NP71 852 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 FBXO6Q9NRD1 293 aaPredicted RBP4.59□□□□□ -1.67
CLK3-219ENST00000567805 C20orf96Q9NUD7 363 aaPredicted RBP4.59□□□□□ -1.67
CLK3-219ENST00000567805 TRMT1Q9NXH9 659 aaKnown RBP4.59□□□□□ -1.67
CLK3-219ENST00000567805 UTP6Q9NYH9 597 aaKnown RBP4.59□□□□□ -1.67
CLK3-219ENST00000567805 IL1RAPL1Q9NZN1 696 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 ANKMY1Q9P2S6 941 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 GALPQ9UBC7 116 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 DHCR7Q9UBM7 475 aaKnown RBP4.59□□□□□ -1.67
CLK3-219ENST00000567805 ASIC3Q9UHC3 531 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 RUVBL2Q9Y230 463 aaKnown RBP4.59□□□□□ -1.67
CLK3-219ENST00000567805 KLHL20Q9Y2M5 609 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 DHRS7Q9Y394 339 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 PTRH2Q9Y3E5 179 aaKnown RBP4.59□□□□□ -1.67
CLK3-219ENST00000567805 ZNF451Q9Y4E5 1061 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 MAD1L1Q9Y6D9 718 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 FAM169AQ9Y6X4 670 aa4.59□□□□□ -1.67
CLK3-219ENST00000567805 DOCK10Q96BY6 2186 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 FLNCQ14315 2725 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 SETXQ7Z333 2677 aaKnown RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 NBPF19A0A087WUL8 3843 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 A0A1W2PPV9 198 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 HYKKA2RU49 373 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 OR2A25A4D2G3 310 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 KRT87PA6NCN2 255 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 ARHGEF33A8MVX0 844 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 GFYI3L273 518 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 AGPSO00116 658 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 PEX12O00623 359 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 ZBTB14O43829 449 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 KLHL41O60662 606 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 DPM1O60762 260 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 CTSVO60911 334 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 VPS26AO75436 327 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 HAUS5O94927 633 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 CCNDBP1O95273 360 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 SLC16A8O95907 504 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 ONECUT2O95948 504 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 PDGFAP04085 211 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 MPC1LP0DKB6 136 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 ERVK-10P10266 1014 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 EZRP15311 586 aaKnown RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 PGAM1P18669 254 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 ITGAXP20702 1163 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 ALAS2P22557 587 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 CMPK1P30085 196 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 OTX2P32243 289 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 RPA3P35244 121 aaPredicted RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 SKIV2L2P42285 1042 aaKnown RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 PNLIPRP1P54315 467 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 MPP1Q00013 466 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 DHX9Q08211 1270 aaKnown RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 CUL1Q13616 776 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 ATP1A4Q13733 1029 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 FASTKQ14296 549 aaKnown RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 CRYMQ14894 314 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 SLC9A5Q14940 896 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 MORF4L2Q15014 288 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 HSP90AA5PQ58FG0 334 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 SPANXN3Q5MJ09 141 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 FRMPD2BQ6IN97 320 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 LRRC8EQ6NSJ5 796 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 UGT3A1Q6NUS8 523 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 PRMT9Q6P2P2 845 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 SUSD1Q6UWL2 747 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 SYDE1Q6ZW31 735 aaPredicted RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 RNF44Q7L0R7 432 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 OVCH1Q7RTY7 1134 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 GALNT7Q86SF2 657 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 MRGPREQ86SM8 312 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 KCNMB4Q86W47 210 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 CNTN4Q8IWV2 1026 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 CLEC1AQ8NC01 280 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 C2CD4AQ8NCU7 369 aaPredicted RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 FDCSPQ8NFU4 85 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 GIMAP7Q8NHV1 300 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 CD200R1Q8TD46 325 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 ASB11Q8WXH4 323 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 SMPDL3AQ92484 453 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 INPP5DQ92835 1189 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 PTERQ96BW5 349 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 GPR21Q99679 349 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 SMAD5Q99717 465 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms