RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 GPR34Q9UPC5 381 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 AP4S1Q9Y587 144 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 TRIM64A6NGJ6 449 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 VEGFDO43915 354 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 RSL1D1O76021 490 aaKnown RBP22.59■■□□□ 1.21
LINC00543-201ENST00000567234 GTF2H3Q13889 308 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.59■■□□□ 1.21
LINC00543-201ENST00000567234 C6orf52Q5T4I8 152 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 EGFLAMQ63HQ2 1017 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 AMIGO2Q86SJ2 522 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 DHFR2Q86XF0 187 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 FAM9CQ8IZT9 166 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 ZNF513Q8N8E2 541 aaPredicted RBP22.59■■□□□ 1.21
LINC00543-201ENST00000567234 GOLM1Q8NBJ4 401 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 ZBTB18Q99592 522 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 ELOVL6Q9H5J4 265 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 CMTM6Q9NX76 183 aa22.59■■□□□ 1.21
LINC00543-201ENST00000567234 TRIM64BA6NI03 449 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 PLK4O00444 970 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 SEC22BO75396 215 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 PDYNP01213 254 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 LAMP2P13473 410 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 HMGCS1Q01581 520 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 TIGD2Q4W5G0 525 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 CES5AQ6NT32 575 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 GPR141Q7Z602 305 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 LILRA2Q8N149 483 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 SELENOMQ8WWX9 145 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 TMEM125Q96AQ2 219 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 PYCR2Q96C36 320 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 HSPBAP1Q96EW2 488 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 DOK1Q99704 481 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 PKP2Q99959 881 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 EFHD1Q9BUP0 239 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 TRIM15Q9C019 465 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 TMEM9Q9P0T7 183 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 ZNF232Q9UNY5 417 aa22.58■■□□□ 1.21
LINC00543-201ENST00000567234 PRUNE2Q8WUY3 3088 aa22.58■■□□□ 1.2
LINC00543-201ENST00000567234 H3BM21 787 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 K7ESM1 405 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 C7P10643 843 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 JUPP14923 745 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 ACPPP15309 386 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 PREPP48147 710 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 CNTN1Q12860 1018 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 SGO1Q5FBB7 561 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 PIP5KL1Q5T9C9 394 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 GPR180Q86V85 440 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 SLC45A3Q96JT2 553 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 MSLNLQ96KJ4 702 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 KXD1Q9BQD3 176 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 ACPTQ9BZG2 426 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 OR2AG1Q9H205 316 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 COPS7BQ9H9Q2 264 aaPredicted RBP22.57■■□□□ 1.2
LINC00543-201ENST00000567234 STOX2Q9P2F5 926 aaPredicted RBP22.57■■□□□ 1.2
LINC00543-201ENST00000567234 GULP1Q9UBP9 304 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 B3GNT3Q9Y2A9 372 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 STON1Q9Y6Q2 735 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 SERPINB7O75635 380 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 POU3F3P20264 500 aaPredicted RBP22.57■■□□□ 1.2
LINC00543-201ENST00000567234 GDI1P31150 447 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 EEFSECP57772 596 aaKnown RBP22.57■■□□□ 1.2
LINC00543-201ENST00000567234 CAPRIN1Q14444 709 aaKnown RBP22.57■■□□□ 1.2
LINC00543-201ENST00000567234 KIAA0040Q15053 153 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 AGTRAPQ6RW13 159 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 ADAMTSL4Q6UY14 1074 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 THOC6Q86W42 341 aaKnown RBP22.57■■□□□ 1.2
LINC00543-201ENST00000567234 OR56A3Q8NH54 315 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 ATG10Q9H0Y0 220 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 FAM8A1Q9UBU6 413 aa22.57■■□□□ 1.2
LINC00543-201ENST00000567234 AQP12BA6NM10 295 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 ITPKAP23677 461 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 SLC7A1P30825 629 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 RELAQ04206 551 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 CHIT1Q13231 466 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 FRG2Q64ET8 278 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 TRAPPC5Q8IUR0 188 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 HID1Q8IV36 788 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 AQP12AQ8IXF9 295 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 LILRA3Q8N6C8 439 aaPredicted RBP22.56■■□□□ 1.2
LINC00543-201ENST00000567234 GIPC3Q8TF64 312 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 EME1Q96AY2 570 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 CMTM7Q96FZ5 175 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 FRG2BQ96QU4 278 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 TRMT61BQ9BVS5 477 aaKnown RBP22.56■■□□□ 1.2
LINC00543-201ENST00000567234 RSPH9Q9H1X1 276 aaPredicted RBP22.56■■□□□ 1.2
LINC00543-201ENST00000567234 ACTR3BQ9P1U1 418 aa22.56■■□□□ 1.2
LINC00543-201ENST00000567234 TRPM6Q9BX84 2022 aa22.55■■□□□ 1.2
LINC00543-201ENST00000567234 PRPS2P11908 318 aa22.55■■□□□ 1.2
LINC00543-201ENST00000567234 ATXN3P54252 364 aaPredicted RBP22.55■■□□□ 1.2
LINC00543-201ENST00000567234 CAMK2GQ13555 558 aaPredicted RBP22.55■■□□□ 1.2
LINC00543-201ENST00000567234 COL19A1Q14993 1142 aa22.55■■□□□ 1.2
LINC00543-201ENST00000567234 USP39Q53GS9 565 aaKnown RBP22.55■■□□□ 1.2
LINC00543-201ENST00000567234 LCN8Q6JVE9 175 aa22.55■■□□□ 1.2
LINC00543-201ENST00000567234 KRT80Q6KB66 452 aa22.55■■□□□ 1.2
LINC00543-201ENST00000567234 PARM1Q6UWI2 310 aa22.55■■□□□ 1.2
LINC00543-201ENST00000567234 PTRH1Q86Y79 214 aaKnown RBP22.55■■□□□ 1.2
LINC00543-201ENST00000567234 OR2T34Q8NGX1 318 aa22.55■■□□□ 1.2
LINC00543-201ENST00000567234 OR2T3Q8NH03 318 aa22.55■■□□□ 1.2
LINC00543-201ENST00000567234 COX14Q96I36 57 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms