RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 NAE1Q13564 534 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CCNIQ14094 377 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 KCTD19Q17RG1 926 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 WSCD2Q2TBF2 565 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CDKL4Q5MAI5 379 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 SH3PXD2AQ5TCZ1 1133 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 IRAK1BP1Q5VVH5 260 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 FRG2Q64ET8 278 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 KLHL24Q6TFL4 600 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 TMPRSS11BQ86T26 416 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 NPAS4Q8IUM7 802 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 TDHQ8IZJ6 230 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 LGI4Q8N135 537 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CENPSQ8N2Z9 138 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 FAM46DQ8NEK8 389 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 HAVCR2Q8TDQ0 301 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 OVCA2Q8WZ82 227 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF516Q92618 1163 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 RHBDF1Q96CC6 855 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 FCRL4Q96PJ5 515 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 FRG2BQ96QU4 278 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 TPK1Q9H3S4 243 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 FAIMQ9NVQ4 179 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF224Q9NZL3 707 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 NFKBIL1Q9UBC1 381 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 AJAP1Q9UKB5 411 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 MGAT4AQ9UM21 535 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 STUB1Q9UNE7 303 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 RNF6Q9Y252 685 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 HES2Q9Y543 173 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 A0A096LPI6 279 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 PRSS51A0A1B0GVH4 220 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 A0A1W2PRB8 838 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 SH3D21A4FU49 640 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 SOBPA7XYQ1 873 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CHURC1-FNTBB4DL54 471 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CLDN4O14493 209 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 WNT9AO14904 365 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 MATN4O95460 622 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 RLN2P04090 185 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 RLN1P04808 185 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 RB1P06400 928 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 H1F0P07305 194 aaKnown RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 DHRS4L1P0CG22 281 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ECHS1P30084 290 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CORO1AP31146 461 aaKnown RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 XKP51811 444 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 STC1P52823 247 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 IST1P53990 364 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 GNG2P59768 71 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 SCAPQ12770 1279 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 BNIP3Q12983 259 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 SCARB2Q14108 478 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 DSG2Q14126 1118 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CTC1Q2NKJ3 1217 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF792Q3KQV3 632 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 NCCRP1Q6ZVX7 275 aaPredicted RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 TMEM135Q86UB9 458 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ZDHHC14Q8IZN3 488 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CLHC1Q8NHS4 586 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 KBTBD7Q8WVZ9 684 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 XAGE5Q8WWM1 108 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 COPS5Q92905 334 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 HMCESQ96FZ2 354 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 TMEM80Q96HE8 168 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 HEPHQ9BQS7 1158 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CNPPD1Q9BV87 410 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 IFT27Q9BW83 186 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 GTPBP2Q9BX10 602 aaKnown RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 PCDHAC1Q9H158 963 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 RANBP3Q9H6Z4 567 aaPredicted RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 PREBQ9HCU5 417 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 DZANK1Q9NVP4 752 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ZDHHC2Q9UIJ5 367 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 GABRQQ9UN88 632 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 TMA7Q9Y2S6 64 aaKnown RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CCRL2O00421 344 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ECI2O75521 394 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 EEDO75530 441 aaKnown RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 APOL3O95236 402 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 NFATC1O95644 943 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 OXSR1O95747 527 aaPredicted RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 TIMP1P01033 207 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 AHSGP02765 367 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC35G6P0C7Q6 338 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 SAGP10523 405 aaPredicted RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CCND3P30281 292 aaPredicted RBP4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 MAGEA6P43360 314 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 MAGEA11P43364 429 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CCR4P51679 360 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CCL23P55773 120 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 DSTNP60981 165 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 MYBPC1Q00872 1141 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF678Q5SXM1 525 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 C6orf141Q5SZD1 244 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 MAMDC4Q6UXC1 1216 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ISLR2Q6UXK2 745 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 CLEC20AQ6ZU45 233 aa4.24□□□□□ -1.73
LPCAT2-208ENST00000566915 ATCAYQ86WG3 371 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms