RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 UGT2B15P54855 530 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 ITGA1P56199 1179 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 RPS14P62263 151 aaKnown RBP15.25■□□□□ 0.03
COMMD4-215ENST00000566843 TOR1AIP1Q5JTV8 583 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 ATAD3CQ5T2N8 411 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 CPA6Q8N4T0 437 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 DNAJC22Q8N4W6 341 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 ATG16L2Q8NAA4 619 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 CLHC1Q8NHS4 586 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 UBTD2Q8WUN7 234 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 HHIPL1Q96JK4 782 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 HHIPQ96QV1 700 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 AASDHPPTQ9NRN7 309 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 EHD3Q9NZN3 535 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 GRIP1Q9Y3R0 1128 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 INSIG1O15503 277 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 NDUFB5O43674 189 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 IGLV3-27P01718 113 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 EBLN1P0CF75 366 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 ITGB6P18564 788 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 POLR2EP19388 210 aaKnown RBP15.24■□□□□ 0.03
COMMD4-215ENST00000566843 C21orf33P30042 268 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-215ENST00000566843 TM4SF4P48230 202 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 OR2B6P58173 313 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 DMPKQ09013 629 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 CAMK2GQ13555 558 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-215ENST00000566843 IQCCQ4KMZ1 466 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 MSANTD1Q6ZTZ1 278 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 STK40Q8N2I9 435 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 NPLOC4Q8TAT6 608 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 GGHQ92820 318 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 SUSD3Q96L08 255 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 CCDC32Q9BV29 185 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 CD244Q9BZW8 370 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 NUAK2Q9H093 628 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 TRAPPC4Q9Y296 219 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 ACTL7AQ9Y615 435 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 DIRAS1O95057 198 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 PIK3CBP42338 1070 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 MRPS6P82932 125 aaKnown RBP15.24■□□□□ 0.03
COMMD4-215ENST00000566843 HTRA3P83110 453 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 SLC14A1Q13336 389 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 DEFB115Q30KQ5 88 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 METTL2BQ6P1Q9 378 aaKnown RBP15.24■□□□□ 0.03
COMMD4-215ENST00000566843 DOK6Q6PKX4 331 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 CBLL1Q75N03 491 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 EIF3MQ7L2H7 374 aaKnown RBP15.24■□□□□ 0.03
COMMD4-215ENST00000566843 P3H2Q8IVL5 708 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 ZZZ3Q8IYH5 903 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 HASPINQ8TF76 798 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 TESCQ96BS2 214 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 CDK5RAP1Q96SZ6 601 aaKnown RBP15.24■□□□□ 0.03
COMMD4-215ENST00000566843 SLC29A3Q9BZD2 475 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 FBXO44Q9H4M3 255 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 REEP1Q9H902 201 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 ITM2CQ9NQX7 267 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 THUMPD1Q9NXG2 353 aaKnown RBP15.24■□□□□ 0.03
COMMD4-215ENST00000566843 ANGPTL3Q9Y5C1 460 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 PCDHB1Q9Y5F3 818 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 LYVE1Q9Y5Y7 322 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 CENPFP49454 3210 aa15.24■□□□□ 0.03
COMMD4-215ENST00000566843 TBKBP1A7MCY6 615 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 CLCA1A8K7I4 914 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 EVPLLA8MZ36 301 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 CAPN5O15484 640 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-215ENST00000566843 C9P02748 559 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 PRPS2P11908 318 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 KDELR2P33947 212 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 GGT2P36268 569 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 TEKQ02763 1124 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 VMACQ2NL98 169 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-215ENST00000566843 BEND7Q8N7W2 519 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-215ENST00000566843 ASCC1Q8N9N2 400 aaKnown RBP15.23■□□□□ 0.03
COMMD4-215ENST00000566843 ZNF675Q8TD23 568 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 CAPNS2Q96L46 248 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 C8orf48Q96LL4 319 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 EPYCQ99645 322 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 OR51E2Q9H255 320 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 WBP11Q9Y2W2 641 aaKnown RBP15.23■□□□□ 0.03
COMMD4-215ENST00000566843 KLK4Q9Y5K2 254 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 PDZK1P1A8MUH7 402 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 TNFRSF10AO00220 468 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 STX7O15400 261 aaKnown RBP15.23■□□□□ 0.03
COMMD4-215ENST00000566843 DDOSTP39656 456 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 IRF3Q14653 427 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 SDHAF4Q5VUM1 108 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 NADSYN1Q6IA69 706 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 ERICH5Q6P6B1 374 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 TTC23LQ6PF05 361 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 VTCN1Q7Z7D3 282 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 FAM9CQ8IZT9 166 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 PAF1Q8N7H5 531 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 LPCAT1Q8NF37 534 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 CINPQ9BW66 212 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-215ENST00000566843 FAM126AQ9BYI3 521 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-215ENST00000566843 REXO4Q9GZR2 422 aaKnown RBP15.23■□□□□ 0.03
COMMD4-215ENST00000566843 MAGEH1Q9H213 219 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 PRDM8Q9NQV8 689 aa15.23■□□□□ 0.03
COMMD4-215ENST00000566843 GPRC5BQ9NZH0 403 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms