RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 UGT2B11O75310 529 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 E2F6O75461 281 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 CLDN7O95471 211 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 SERPINA1P01009 418 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 C8GP07360 202 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 EPORP19235 508 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 HNMTP50135 292 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 IST1P53990 364 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 CXCR4P61073 352 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 PHC1P78364 1004 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 GPM6BQ13491 265 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 GBX1Q14549 363 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 ACOX1Q15067 660 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 TEAD2Q15562 447 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 MEP1AQ16819 746 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 DPY19L1Q2PZI1 675 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 LAIR2Q6ISS4 152 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 XKR5Q6UX68 686 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 RBM23Q86U06 439 aaKnown RBP16.3■□□□□ 0.2
CMTM3-213ENST00000566756 SERPINA11Q86U17 422 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 CHPFQ8IZ52 775 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 L3MBTL4Q8NA19 623 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 NETO1Q8TDF5 533 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 CHPT1Q8WUD6 406 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 TCEAL4Q96EI5 215 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 FCRL1Q96LA6 429 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 NODALQ96S42 347 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 TBCDQ9BTW9 1192 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 EVLQ9UI08 416 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-213ENST00000566756 ENPP5Q9UJA9 477 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 PPIL1Q9Y3C6 166 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 MAGEB3O15480 346 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 HS6ST1O60243 411 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 NOBOXO60393 691 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 PRMT3O60678 531 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 PAPLNO95428 1278 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 IGSF6O95976 241 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 HNRNPCP07910 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
CMTM3-213ENST00000566756 PCMT1P22061 227 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 TRPC1P48995 793 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 RPIAP49247 311 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 KEAP1Q14145 624 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 ARHGEF7Q14155 803 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 ZDHHC20Q5W0Z9 365 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 CPZQ66K79 652 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 FAM109BQ6ICB4 259 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-213ENST00000566756 BPIFB6Q8NFQ5 453 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 WFDC5Q8TCV5 224 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 SLC12A9Q9BXP2 914 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 TM6SF2Q9BZW4 377 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 TDP1Q9NUW8 608 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 KIAA1522Q9P206 1035 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-213ENST00000566756 BAG5Q9UL15 447 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 IGLV3-16A0A075B6K0 115 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 K7ERQ8 282 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 ZNF197O14709 1029 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 SLC16A5O15375 505 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 ZBTB11O95625 1053 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-213ENST00000566756 PDYNP01213 254 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 MPC1LP0DKB6 136 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 JUNDP17535 347 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 SERPINA4P29622 427 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 VAC14Q08AM6 782 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 MTAPQ13126 283 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 SP140Q13342 867 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 ANKDD1AQ495B1 522 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 GTDC1Q4AE62 458 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 DNAJC14Q6Y2X3 702 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-213ENST00000566756 DCDC5Q6ZRR9 648 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 RBM12BQ8IXT5 1001 aaKnown RBP16.29■□□□□ 0.2
CMTM3-213ENST00000566756 PHACTR4Q8IZ21 702 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 SELENOMQ8WWX9 145 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 CSF3RQ99062 836 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 FUNDC2Q9BWH2 189 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 UTS2RQ9UKP6 389 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 DLGAP4Q9Y2H0 992 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 HCFC2Q9Y5Z7 792 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 MYOFQ9NZM1 2061 aa16.29■□□□□ 0.2
CMTM3-213ENST00000566756 NUP210Q8TEM1 1887 aaPredicted RBP16.28■□□□□ 0.2
CMTM3-213ENST00000566756 NUAK1O60285 661 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 IMPDH2P12268 514 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 SLC6A12P48065 614 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 KCNC4Q03721 635 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 LAPTM5Q13571 262 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 SHHQ15465 462 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 SGO1Q5FBB7 561 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 ERICH5Q6P6B1 374 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 C16orf87Q6PH81 154 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 SLC16A12Q6ZSM3 486 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 TPRG1Q6ZUI0 275 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 TMEM179BQ7Z7N9 219 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 HS3ST5Q8IZT8 346 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 PIK3C3Q8NEB9 887 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 CSGALNACT1Q8TDX6 532 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 ELOVL6Q9H5J4 265 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 TM9SF3Q9HD45 589 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 SLC6A13Q9NSD5 602 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 ABCB8Q9NUT2 735 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 ARL15Q9NXU5 204 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 CCL26Q9Y258 94 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms