RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 CDH1P12830 882 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 ETS1P14921 441 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 GP5P40197 560 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 ETV6P41212 452 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 EIF2DP41214 584 aaKnown RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 BTDP43251 543 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 RPS5P46782 204 aaKnown RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 PIK3CGP48736 1102 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 MRPL19P49406 292 aaKnown RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 KPNA2P52292 529 aaKnown RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 ZNF132P52740 706 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 LBX1P52954 281 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 RAD23AP54725 363 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 CDH15P55291 814 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 EVA1CP58658 441 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 YWHAEP62258 255 aaKnown RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 RPL10AP62906 217 aaKnown RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SLC25A11Q02978 314 aaKnown RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 TNFAIP2Q03169 654 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 PRKCDQ05655 676 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SEMA5AQ13591 1074 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SNRNP35Q16560 246 aaKnown RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SUSD4Q5VX71 490 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 CCSAPQ6IQ19 270 aaPredicted RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 PNCKQ6P2M8 343 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 B3GNT9Q6UX72 402 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 RFPL4BQ6ZWI9 263 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 CYP4V2Q6ZWL3 525 aaPredicted RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 NIPA1Q7RTP0 329 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 PELI3Q8N2H9 469 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 ZNF781Q8N8C0 355 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 TMEM35BQ8NCS4 154 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 FAF2Q96CS3 445 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 HDAC11Q96DB2 347 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 DYNLL2Q96FJ2 89 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 AURKBQ96GD4 344 aaPredicted RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SLC39A13Q96H72 371 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 CCDC17Q96LX7 622 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 RIT2Q99578 217 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SLC29A1Q99808 456 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 CPNE1Q99829 537 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 APOL4Q9BPW4 351 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 HERC2P3Q9BVR0 1158 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 MTMR12Q9C0I1 747 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SNX25Q9H3E2 840 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 FAM124BQ9H5Z6 455 aaPredicted RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SYNDIG1Q9H7V2 258 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SPC25Q9HBM1 224 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 ASNSD1Q9NWL6 643 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 ACTR3BQ9P1U1 418 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 ABCD2Q9UBJ2 740 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 RABL2AQ9UBK7 228 aaPredicted RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 MORF4L1Q9UBU8 362 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 STOML2Q9UJZ1 356 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 TRPC5Q9UL62 973 aaPredicted RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 PCDHAC2Q9Y5I4 1007 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SNX5Q9Y5X3 404 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 MAU2Q9Y6X3 613 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 HSPE1-MOB4S4R3N1 261 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 COL5A2P05997 1499 aaPredicted RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 QSER1Q2KHR3 1735 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 LOC100653049A0A140TA62 436 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 PNMA8CA0A1B0GUJ8 204 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 DHRS12A0PJE2 317 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 CENPXA8MT69 81 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 LOC110117498-PIK3R3F6TDL0 507 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 GOLGA8SH3BPF8 625 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SOCS2O14508 198 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 MEIS2O14770 477 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 DCLK1O15075 740 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 PPM1DO15297 605 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 ZW10O43264 779 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 CST8O60676 142 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 TULP3O75386 442 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 BANF1O75531 89 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 LYPLA1O75608 230 aaPredicted RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 KRT34O76011 436 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 NDST3O95803 873 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 YES1P07947 543 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 KRT19P08727 400 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 ENO3P13929 434 aaPredicted RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 PGAM1P18669 254 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 MATN1P21941 496 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 RBL1P28749 1068 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SPRP35270 261 aaPredicted RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 RPS9P46781 194 aaKnown RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 ALDH7A1P49419 539 aaKnown RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 NDST1P52848 882 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 PLA2G16P53816 162 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 PPP2R2BQ00005 443 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 CYP24A1Q07973 514 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 ITKQ08881 620 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 NME3Q13232 169 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 NOGQ13253 232 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 KCTD19Q17RG1 926 aaPredicted RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SLC9B1Q4ZJI4 515 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 BRDTQ58F21 947 aaPredicted RBP3.44□□□□□ -1.86
LINC01416-201ENST00000563553 SPANXN3Q5MJ09 141 aa3.44□□□□□ -1.86
LINC01416-201ENST00000563553 RSBN1Q5VWQ0 802 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms