RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 MNDAP41218 407 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 RGS7P49802 495 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 ASCL1P50553 236 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 LIMK1P53667 647 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 DVL1P1P54792 670 aaPredicted RBP3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 NAGLUP54802 743 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 DMP1Q13316 513 aaPredicted RBP3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 CUL3Q13618 768 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 PPA1Q15181 289 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 RBBP5Q15291 538 aaKnown RBP3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 MCMDC2Q4G0Z9 681 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 IFI44LQ53G44 452 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 ASPRV1Q53RT3 343 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 SYT14P1Q58G82 188 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 MDH1BQ5I0G3 518 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC27A1Q6PCB7 646 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 CORO6Q6QEF8 472 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 C19orf48Q6RUI8 117 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 NRARPQ7Z6K4 114 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 TIGD4Q8IY51 512 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 CLYBLQ8N0X4 340 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 DNAJC22Q8N4W6 341 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 CPSF7Q8N684 471 aaKnown RBP3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 THAP8Q8NA92 274 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 KLHDC9Q8NEP7 349 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 OR7G3Q8NG95 312 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 OR8H1Q8NGG4 311 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 ATL1Q8WXF7 558 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 RAD54LQ92698 747 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 PROX1Q92786 737 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 ERO1AQ96HE7 468 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 ST6GAL2Q96JF0 529 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 SPATA13Q96N96 652 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 KLHL5Q96PQ7 755 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 CCDC3Q9BQI4 270 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 BTBD10Q9BSF8 475 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 LSG1Q9H089 658 aaKnown RBP3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 TFB2MQ9H5Q4 396 aaKnown RBP3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 LMAN1LQ9HAT1 526 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 ZBTB20Q9HC78 741 aaPredicted RBP3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 IL1RAPL2Q9NP60 686 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 ACKR4Q9NPB9 350 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 GKN1Q9NS71 199 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 P4HTMQ9NXG6 502 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 TAAR2Q9P1P5 351 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 ERRFI1Q9UJM3 462 aaPredicted RBP3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 LIPT1Q9Y234 373 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 GPRASP1Q5JY77 1395 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 A0A1W2PPK0 400 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 BICDL2A1A5D9 508 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 GTPBP10A4D1E9 387 aaKnown RBP3□□□□□ -1.93
SHCBP1-202ENST00000563219 OOEPA6NGQ2 149 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 C5orf52A6NGY3 159 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 GAPDHSO14556 408 aaPredicted RBP3□□□□□ -1.93
SHCBP1-202ENST00000563219 IFIT3O14879 490 aaKnown RBP3□□□□□ -1.93
SHCBP1-202ENST00000563219 REC8O95072 547 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC4A1P02730 911 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 CSN3P07498 182 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 ANKRD34CP0C6C1 535 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 SPP1P10451 314 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 FGF5P12034 268 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 EEF2P13639 858 aaKnown RBP3□□□□□ -1.93
SHCBP1-202ENST00000563219 MSH3P20585 1137 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 ANOS1P23352 680 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 PTGER4P35408 488 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 NKX2-1P43699 371 aaPredicted RBP3□□□□□ -1.93
SHCBP1-202ENST00000563219 NT5C2P49902 561 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 GMPSP49915 693 aaPredicted RBP3□□□□□ -1.93
SHCBP1-202ENST00000563219 THOP1P52888 689 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 CDH11P55287 796 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 BPIFB3P59826 476 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 ASIC1P78348 528 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 CX3CL1P78423 397 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 GFPT1Q06210 699 aaPredicted RBP3□□□□□ -1.93
SHCBP1-202ENST00000563219 NPRL3Q12980 569 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 MORF4L2Q15014 288 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 UGCGQ16739 394 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 HFEQ30201 348 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 C2orf76Q3KRA6 126 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 ELFN2Q5R3F8 820 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 TXNRD3NBQ6F5E7 133 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 PRR27Q6MZM9 219 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 ANO5Q75V66 913 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 TMEM139Q8IV31 216 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 AQP12AQ8IXF9 295 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 MMD2Q8IY49 270 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 TRIML1Q8N9V2 468 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 PPFIBP2Q8ND30 876 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 NPEPL1Q8NDH3 523 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 NCOA7Q8NI08 942 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 RNF128Q8TEB7 428 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 ZNF473Q8WTR7 871 aaKnown RBP3□□□□□ -1.93
SHCBP1-202ENST00000563219 PIGBQ92521 554 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 ATP6V0A1Q93050 837 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 PYCR2Q96C36 320 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 AP2M1Q96CW1 435 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 TBC1D31Q96DN5 1066 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 ALG14Q96F25 216 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 SGK494Q96LW2 274 aa3□□□□□ -1.93
SHCBP1-202ENST00000563219 RUNDC3BQ96NL0 473 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms