RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 ATP1A4Q13733 1029 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 ITGA9Q13797 1035 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 AFTPHQ6ULP2 937 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 CNTN4Q8IWV2 1026 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 SYTL1Q8IYJ3 562 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 OR4E2Q8NGC2 313 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 OR2L2Q8NH16 312 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 TCTN2Q96GX1 697 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 SMC6Q96SB8 1091 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 SELENOSQ9BQE4 189 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 LATS2Q9NRM7 1088 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 SMOXQ9NWM0 555 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 POMT2Q9UKY4 750 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 TCFL5Q9UL49 500 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 PSAT1Q9Y617 370 aa12.91□□□□□ -0.34
SPG7-207ENST00000563218 CCDC162PA2VCL2 907 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 GSAPA4D1B5 854 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 MGAT4DA6NG13 374 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 FOXO6A8MYZ6 492 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 BTN3A3O00478 584 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 BTN3A1O00481 513 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 CCL22O00626 93 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 CLDN1O95832 211 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 GOT2P00505 430 aaKnown RBP12.9□□□□□ -0.34
SPG7-207ENST00000563218 SLC35G4P0C7Q5 338 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 CDH3P22223 829 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 PSMA3P25788 255 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 SLC1A2P43004 574 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 BMPR2Q13873 1038 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 ZNF470Q6ECI4 717 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 KIAA0408Q6ZU52 694 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 BPHLQ86WA6 291 aaPredicted RBP12.9□□□□□ -0.34
SPG7-207ENST00000563218 C2CD4AQ8NCU7 369 aaPredicted RBP12.9□□□□□ -0.34
SPG7-207ENST00000563218 ZNF398Q8TD17 642 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 DTX3LQ8TDB6 740 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 MZB1Q8WU39 189 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 CLIP3Q96DZ5 547 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 CDKN2AIPNLQ96HQ2 116 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 RBBP8Q99708 897 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 FAM96AQ9H5X1 160 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 CNOT10Q9H9A5 744 aaKnown RBP12.9□□□□□ -0.34
SPG7-207ENST00000563218 KCNK9Q9NPC2 374 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 CATSPERZQ9NTU4 200 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 MAP10Q9P2G4 905 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 FBXO5Q9UKT4 447 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 ZNF451Q9Y4E5 1061 aa12.9□□□□□ -0.34
SPG7-207ENST00000563218 DNMT3AQ9Y6K1 912 aaPredicted RBP12.9□□□□□ -0.34
SPG7-207ENST00000563218 DIDO1Q9BTC0 2240 aaKnown RBP12.9□□□□□ -0.34
SPG7-207ENST00000563218 A0A1W2PPM1 405 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 HCRTR1O43613 425 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 CTSBP07858 339 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 RAB40ALP0C0E4 278 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 PRSS56P0CW18 603 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 CBX1P83916 185 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 XIAPP98170 497 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 ILF2Q12905 390 aaKnown RBP12.89□□□□□ -0.35
SPG7-207ENST00000563218 CTBP1Q13363 440 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 BCL7AQ4VC05 210 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 FASTKD1Q53R41 847 aaKnown RBP12.89□□□□□ -0.35
SPG7-207ENST00000563218 TMTC4Q5T4D3 741 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 MROH9Q5TGP6 573 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 ZDHHC20Q5W0Z9 365 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 ZNF385CQ66K41 422 aaPredicted RBP12.89□□□□□ -0.35
SPG7-207ENST00000563218 MRNIPQ6NTE8 343 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 ARMC6Q6NXE6 501 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 SDCCAG8Q86SQ7 713 aaPredicted RBP12.89□□□□□ -0.35
SPG7-207ENST00000563218 DENND6AQ8IWF6 608 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 CFAP206Q8IYR0 622 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 OR4L1Q8NH43 312 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 PRR7Q8TB68 274 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 INPP5DQ92835 1189 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 ALKBH8Q96BT7 664 aaKnown RBP12.89□□□□□ -0.35
SPG7-207ENST00000563218 LRFN5Q96NI6 719 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 C19orf43Q9BQ61 176 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 NLNQ9BYT8 704 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 RHOJQ9H4E5 214 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 ASB8Q9H765 288 aa12.89□□□□□ -0.35
SPG7-207ENST00000563218 ACTR5Q9H9F9 607 aaPredicted RBP12.89□□□□□ -0.35
SPG7-207ENST00000563218 ERRFI1Q9UJM3 462 aaPredicted RBP12.89□□□□□ -0.35
SPG7-207ENST00000563218 SVILO95425 2214 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 ANKRD17O75179 2603 aaKnown RBP12.88□□□□□ -0.35
SPG7-207ENST00000563218 OR51F1A6NGY5 319 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 H7C0S8 307 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 CD3EAPO15446 510 aaKnown RBP12.88□□□□□ -0.35
SPG7-207ENST00000563218 SRP72O76094 671 aaKnown RBP12.88□□□□□ -0.35
SPG7-207ENST00000563218 AHSGP02765 367 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 KLK3P07288 261 aaPredicted RBP12.88□□□□□ -0.35
SPG7-207ENST00000563218 KRT4P19013 534 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 OGNP20774 298 aaKnown RBP12.88□□□□□ -0.35
SPG7-207ENST00000563218 OTX2P32243 289 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 MC4RP32245 332 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 CD151P48509 253 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 CDKN1CP49918 316 aaPredicted RBP12.88□□□□□ -0.35
SPG7-207ENST00000563218 GYS2P54840 703 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 MPP1Q00013 466 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 NCF4Q15080 339 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 NR6A1Q15406 480 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 DEFB110Q30KQ9 67 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 TIFABQ6ZNK6 161 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 GALNT7Q86SF2 657 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms