RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 OSBPL8Q9BZF1 889 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 SLC26A1Q9H2B4 701 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 RUBCNLQ9H714 662 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 MARCH4Q9P2E8 410 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 ZNF282Q9UDV7 671 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 TTC7AQ9ULT0 858 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 PACSIN2Q9UNF0 486 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 NEU2Q9Y3R4 380 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 DUSP10Q9Y6W6 482 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 INTS1Q8N201 2190 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 HRNRQ86YZ3 2850 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 IGHV1-45A0A0A0MS14 117 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 TRAV17A0A0B4J275 112 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 TCRBV7S2A1N4TA0A589 114 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 RCCD1A6NED2 376 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 H7C0S8 307 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 RASGRF2O14827 1237 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 MAN1A2O60476 641 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 SLC19A2O60779 497 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 WFS1O76024 890 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 HEXBP07686 556 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 ERVK-10P10266 1014 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 ESRRAP11474 423 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 CARSP49589 748 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 EMP2P54851 167 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 ZC3H12BQ5HYM0 836 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 ATG9BQ674R7 924 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 KCTD11Q693B1 232 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 PACS1Q6VY07 963 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 NDUFAF7Q7L592 441 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 PLD3Q8IV08 490 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 VSTM4Q8IW00 320 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 DCUN1D3Q8IWE4 304 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 ZNF808Q8N4W9 903 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 DNAAF3Q8N9W5 541 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 DENND1AQ8TEH3 1009 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 ALG3Q92685 438 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 MMABQ96EY8 250 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 LMF1Q96S06 567 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 MACROD1Q9BQ69 325 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 TMEM121Q9BTD3 319 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 ANP32EQ9BTT0 268 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 RBCK1Q9BYM8 510 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 CHRNA10Q9GZZ6 450 aa11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 NXT1Q9UKK6 140 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 MRPS2Q9Y399 296 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 KLF2Q9Y5W3 355 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-202ENST00000561960 EML6Q6ZMW3 1958 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 NAV3Q8IVL0 2385 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 A0A0A6YYC8 382 aaPredicted RBP11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 HEATR9A2RTY3 570 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 MROH6A6NGR9 719 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 H0YGG7 62 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 I3L1I5 382 aaPredicted RBP11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 P2RX6O15547 441 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 USP1O94782 785 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 S1PR4O95977 384 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 PTMAP06454 111 aaKnown RBP11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 NAP1L1P55209 391 aaKnown RBP11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 ARF3P61204 181 aaPredicted RBP11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 CRADDP78560 199 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 ITIH4Q14624 930 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 PCOLCEQ15113 449 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 DNAJC21Q5F1R6 531 aaKnown RBP11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 TCTE1Q5JU00 501 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 RPUSD3Q6P087 351 aaKnown RBP11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 ZNF534Q76KX8 674 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 PRSS41Q7RTY9 318 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 CDH24Q86UP0 819 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 CEP97Q8IW35 865 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 BEST3Q8N1M1 668 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 AMER3Q8N944 861 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 RNF214Q8ND24 703 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 PPFIBP2Q8ND30 876 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 OR2L3Q8NG85 312 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 ATG4AQ8WYN0 398 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 NRGNQ92686 78 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 SIGLEC12Q96PQ1 595 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 FERMT1Q9BQL6 677 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 DPH7Q9BTV6 452 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 LRRC40Q9H9A6 602 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 ARNT2Q9HBZ2 717 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 INTS7Q9NVH2 962 aaKnown RBP11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 MKL2Q9ULH7 1088 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 RUVBL1Q9Y265 456 aaKnown RBP11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 PCDHA13Q9Y5I0 950 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 FAM169AQ9Y6X4 670 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 SPG11Q96JI7 2443 aa11.1□□□□□ -0.63
NSMCE1-202ENST00000561960 A0A1W2PPV9 198 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 FITM1A5D6W6 292 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 NPIPA5E9PKD4 350 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 PRAMEF2O60811 474 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 SERPINA7P05543 415 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 TPM1P09493 284 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 ETS1P14921 441 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 CXCR2P25025 360 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 AOAHP28039 575 aa11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 CTNNA1P35221 906 aaKnown RBP11.09□□□□□ -0.63
NSMCE1-202ENST00000561960 PTGER4P35408 488 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms