RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CHD9Q3L8U1 2897 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 FAM220BPB1ANY3 271 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 GSTA4O15217 222 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 LRATO95237 230 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 RASAL1O95294 804 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 CCR3P51677 355 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 HNRNPFP52597 415 aaKnown RBP9.5□□□□□ -0.89
SMG1-205ENST00000561947 PLOD1Q02809 727 aaPredicted RBP9.5□□□□□ -0.89
SMG1-205ENST00000561947 PGS1Q32NB8 556 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 XKR5Q6UX68 686 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 TMEM132CQ8N3T6 1108 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 CXorf40AQ8TE69 158 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 FIG4Q92562 907 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 ZNF514Q96K75 400 aaPredicted RBP9.5□□□□□ -0.89
SMG1-205ENST00000561947 EGLN2Q96KS0 407 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 INPP5KQ9BT40 448 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 HDAC8Q9BY41 377 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 MRPS26Q9BYN8 205 aaKnown RBP9.5□□□□□ -0.89
SMG1-205ENST00000561947 ANKRD60Q9BZ19 345 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 BRF2Q9HAW0 419 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 SGK2Q9HBY8 427 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 PRSS16Q9NQE7 514 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 SLC6A13Q9NSD5 602 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 GPRC5BQ9NZH0 403 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 ATXN10Q9UBB4 475 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 RUVBL1Q9Y265 456 aaKnown RBP9.5□□□□□ -0.89
SMG1-205ENST00000561947 INVSQ9Y283 1065 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 RNF103-CHMP3A0A140T963 221 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 C17orf113A0A1B0GUU1 675 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 ELOVL7A1L3X0 281 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 DLGAP1O14490 977 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 PRMT3O60678 531 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 C7P10643 843 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 PTPN6P29350 595 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 MTAPQ13126 283 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 RUNX3Q13761 415 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 DDX39BQ13838 428 aaKnown RBP9.5□□□□□ -0.89
SMG1-205ENST00000561947 E2F2Q14209 437 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 IYDQ6PHW0 289 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 ISLR2Q6UXK2 745 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 GPR149Q86SP6 731 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 GPR180Q86V85 440 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 ANKRD46Q86W74 232 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 CALHM3Q86XJ0 350 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 SYT12Q8IV01 421 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 MICU2Q8IYU8 434 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 PHACTR4Q8IZ21 702 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 ZNF480Q8WV37 535 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 TFAP2CQ92754 450 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 NELL1Q92832 810 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 RAB7BQ96AH8 199 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 METTL2AQ96IZ6 378 aaKnown RBP9.5□□□□□ -0.89
SMG1-205ENST00000561947 MTERF1Q99551 399 aaKnown RBP9.5□□□□□ -0.89
SMG1-205ENST00000561947 LMAN2LQ9H0V9 348 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 KAT8Q9H7Z6 458 aaKnown RBP9.5□□□□□ -0.89
SMG1-205ENST00000561947 THAP10Q9P2Z0 257 aaPredicted RBP9.5□□□□□ -0.89
SMG1-205ENST00000561947 PCDHGA11Q9Y5H2 935 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 KCNE2Q9Y6J6 123 aa9.5□□□□□ -0.89
SMG1-205ENST00000561947 VEGFDO43915 354 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 SCELO95171 688 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 PGM3O95394 542 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 MT-ND1P03886 318 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 EPHX1P07099 455 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 RAP2AP10114 183 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 ZNF8P17098 575 aaPredicted RBP9.49□□□□□ -0.89
SMG1-205ENST00000561947 PRPS1L1P21108 318 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 GJA4P35212 333 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 P2RY2P41231 377 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 KIR3DL1P43629 444 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 GZMMP51124 257 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 PNLIPRP1P54315 467 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 TBPL1P62380 186 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 CHRNB3Q05901 458 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 FCHO2Q0JRZ9 810 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 DPY19L1Q2PZI1 675 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 FAM98BQ52LJ0 330 aaKnown RBP9.49□□□□□ -0.89
SMG1-205ENST00000561947 OR4F3Q6IEY1 312 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 CAPN13Q6MZZ7 669 aaPredicted RBP9.49□□□□□ -0.89
SMG1-205ENST00000561947 GCNT7Q6ZNI0 430 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 ZNF547Q8IVP9 402 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 OR52E4Q8NGH9 312 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 GFM2Q969S9 779 aaKnown RBP9.49□□□□□ -0.89
SMG1-205ENST00000561947 PRPF18Q99633 342 aaKnown RBP9.49□□□□□ -0.89
SMG1-205ENST00000561947 TBCDQ9BTW9 1192 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 BDH2Q9BUT1 245 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 UGT2B28Q9BY64 529 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 ZDHHC4Q9NPG8 344 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 ZNF639Q9UID6 485 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 HCN2Q9UL51 889 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 PADI4Q9UM07 663 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 GPR34Q9UPC5 381 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 FADS3Q9Y5Q0 445 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 PCM1Q15154 2024 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 DOCK8Q8NF50 2099 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 MYOCOSA0A1B0GUC4 107 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 ANTXRLA6NF34 631 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 PLOD2O00469 737 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 CXCR6O00574 342 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 EI24O14681 340 aa9.49□□□□□ -0.89
SMG1-205ENST00000561947 POP7O75817 140 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms