RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 PCLAFQ15004 111 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 LPAL2Q16609 132 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 CPSF6Q16630 551 aaKnown RBP eCLIP5.3□□□□□ -1.56
ZEB1-220ENST00000560909 CCSMST1Q4G0I0 132 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 COX20Q5RI15 118 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 PRAMEF14Q5SWL7 426 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 SULT1C3Q6IMI6 304 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 SLC30A9Q6PML9 568 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 TMEM26Q6ZUK4 368 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 UBE2R2Q712K3 238 aaPredicted RBP5.3□□□□□ -1.56
ZEB1-220ENST00000560909 TAF8Q7Z7C8 310 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 SLC22A9Q8IVM8 553 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 TCAIMQ8N3R3 496 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 ARL14Q8N4G2 192 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 ARFGAP2Q8N6H7 521 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 FAM46DQ8NEK8 389 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 OR5AR1Q8NGP9 310 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 RAB3IL1Q8TBN0 382 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 MDM1Q8TC05 714 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 MAGEC3Q8TD91 643 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 LMX1AQ8TE12 382 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 SLC37A2Q8TED4 501 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 ATL1Q8WXF7 558 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 RAD51AP1Q96B01 352 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 L3HYPDHQ96EM0 354 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 C12orf66Q96MD2 445 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 FOPNLQ96NB1 174 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 CAMK1GQ96NX5 476 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 FAM111AQ96PZ2 611 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 PKP4Q99569 1192 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 DUSP23Q9BVJ7 150 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 SGPP1Q9BX95 441 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 NUSAP1Q9BXS6 441 aaKnown RBP5.3□□□□□ -1.56
ZEB1-220ENST00000560909 TRIM54Q9BYV2 358 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 TRIT1Q9H3H1 467 aaKnown RBP5.3□□□□□ -1.56
ZEB1-220ENST00000560909 C12orf65Q9H3J6 166 aaKnown RBP5.3□□□□□ -1.56
ZEB1-220ENST00000560909 GAREM1Q9H706 876 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 IL21RQ9HBE5 538 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 PARD6AQ9NPB6 346 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 OR6C2Q9NZP2 312 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 SEMA5BQ9P283 1151 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 CPNE7Q9UBL6 633 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 MOSPD1Q9UJG1 213 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 HAO1Q9UJM8 370 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 ASF1AQ9Y294 204 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 KLK4Q9Y5K2 254 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 TNPO3Q9Y5L0 923 aaKnown RBP5.3□□□□□ -1.56
ZEB1-220ENST00000560909 COLEC10Q9Y6Z7 277 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 U3KQA8 63 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 CEP192Q8TEP8 1941 aa5.3□□□□□ -1.56
ZEB1-220ENST00000560909 CNOT1A5YKK6 2376 aaKnown RBP5.3□□□□□ -1.56
ZEB1-220ENST00000560909 ASCC3Q8N3C0 2202 aaKnown RBP5.29□□□□□ -1.56
ZEB1-220ENST00000560909 A0A1W2PPV9 198 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 EME2A4GXA9 379 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-220ENST00000560909 SRRM3A6NNA2 597 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-220ENST00000560909 PDZK1P1A8MUH7 402 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 UBXN8O00124 270 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 PPM1DO15297 605 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 NUDT21O43809 227 aaKnown RBP5.29□□□□□ -1.56
ZEB1-220ENST00000560909 TRIM13O60858 407 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 CBFA2T3O75081 653 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 SNNO75324 88 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-220ENST00000560909 SNUPNO95149 360 aaKnown RBP5.29□□□□□ -1.56
ZEB1-220ENST00000560909 FKBP9O95302 570 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 SLC16A8O95907 504 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 CFIP05156 583 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 ANXA5P08758 320 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 HIST1H2AGP0C0S8 130 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-220ENST00000560909 MYL2P10916 166 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 FGF3P11487 239 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-220ENST00000560909 CD59P13987 128 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 EPORP19235 508 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 TAC1P20366 129 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 HIST1H2ADP20671 130 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 GRK2P25098 689 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 IMPA1P29218 277 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 PKLRP30613 574 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 ALDH3A1P30838 453 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 GLRBP48167 497 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 RAB28P51157 221 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 LIMK1P53667 647 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 HERVK_113P63132 956 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 RELAQ04206 551 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 PDK4Q16654 411 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 CLPPQ16740 277 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-220ENST00000560909 C14orf28Q4W4Y0 310 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 UNC50Q53HI1 259 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 ZNF678Q5SXM1 525 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 TMEM164Q5U3C3 297 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 LIPMQ5VYY2 423 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 CES4AQ5XG92 561 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 ANKS6Q68DC2 871 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 TCEAL6Q6IPX3 200 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 ZCCHC8Q6NZY4 707 aaKnown RBP5.29□□□□□ -1.56
ZEB1-220ENST00000560909 AGTRAPQ6RW13 159 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 ATG14Q6ZNE5 492 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 ACAD11Q709F0 780 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 LRRC70Q7Z2Q7 622 aa5.29□□□□□ -1.56
ZEB1-220ENST00000560909 MTERF4Q7Z6M4 381 aaKnown RBP5.29□□□□□ -1.56
ZEB1-220ENST00000560909 SLC9B2Q86UD5 537 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms