RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 GRID1Q9ULK0 1009 aa6.79□□□□□ -1.32
CTDSPL2-210ENST00000560834 ATXN7L1Q9ULK2 861 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-210ENST00000560834 SH2B3Q9UQQ2 575 aa6.79□□□□□ -1.32
CTDSPL2-210ENST00000560834 PCDHGA1Q9Y5H4 931 aa6.79□□□□□ -1.32
CTDSPL2-210ENST00000560834 RP1P56715 2156 aa6.79□□□□□ -1.32
CTDSPL2-210ENST00000560834 GVINP1Q7Z2Y8 2422 aa6.79□□□□□ -1.32
CTDSPL2-210ENST00000560834 ZFHX2Q9C0A1 2572 aaPredicted RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 IGKV1-8A0A0C4DH67 115 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SPAARA0A1B0GVQ0 90 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 PIPSLA2A3N6 862 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 GSAPA4D1B5 854 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 PABPN1LA6NDY0 278 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 ZNF839A8K0R7 811 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 C2orf74A8MZ97 194 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 STX16-NPEPL1H3BU86 382 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 MATN2O00339 956 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 E2F3O00716 465 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 STX16O14662 325 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 TM9SF1O15321 606 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 NRP2O60462 931 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 DLX3O60479 287 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SMIM24O75264 130 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 IPO13O94829 963 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 WDR47O94967 919 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 ZWINTO95229 277 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SIX3O95343 332 aaPredicted RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 S100BP04271 92 aaPredicted RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 FTH1P19P0C7X4 201 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 MYL2P10916 166 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 GFAPP14136 432 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 EPORP19235 508 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 ATP5F1P24539 256 aaPredicted RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 OAS2P29728 719 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 ALDH4A1P30038 563 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 HSD17B2P37059 387 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 GDF5P43026 501 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 LSSP48449 732 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 NOVA1P51513 510 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SLC18A1P54219 525 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 CLDN6P56747 220 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 WDR4P57081 412 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 YBX1P67809 324 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 ILKQ13418 452 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SQSTM1Q13501 440 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 NAE1Q13564 534 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 KIR2DS3Q14952 304 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 PCBP2Q15366 365 aaKnown RBP eCLIP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 TRIP6Q15654 476 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 PFKFB4Q16877 469 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SLC5A12Q1EHB4 618 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 RSPO4Q2I0M5 234 aaPredicted RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 AMZ1Q400G9 498 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SPESP1Q6UW49 350 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 LCTLQ6UWM7 567 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 RPS27LQ71UM5 84 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 LRRC70Q7Z2Q7 622 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SLCO6A1Q86UG4 719 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 TRIM73Q86UV7 250 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 ALYREFQ86V81 257 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SLITRK4Q8IW52 837 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 FAM20CQ8IXL6 584 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 RAB42Q8N4Z0 105 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 GOLGA6L1Q8N7Z2 621 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 OR2L3Q8NG85 312 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 OR2A1Q8NGT9 310 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 ATL1Q8WXF7 558 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SMPDL3AQ92484 453 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 ESAMQ96AP7 390 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 FAM122AQ96E09 287 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 PHF21BQ96EK2 531 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 L3HYPDHQ96EM0 354 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 MED8Q96G25 268 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 PPM1MQ96MI6 270 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SELENOSQ9BQE4 189 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 MECRQ9BV79 373 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 C1QTNF3Q9BXJ4 246 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 IQCGQ9H095 443 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SLC32A1Q9H598 525 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SYNDIG1Q9H7V2 258 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 SLC6A20Q9NP91 592 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 INTS7Q9NVH2 962 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 HRASLS2Q9NWW9 162 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 PGPEP1Q9NXJ5 209 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 EPHA6Q9UF33 1036 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 TAC3Q9UHF0 121 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 MID2Q9UJV3 735 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 PCTPQ9UKL6 214 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 TMCO1Q9UM00 188 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 ENTPD2Q9Y5L3 495 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 PTPRBP23467 1997 aa6.78□□□□□ -1.32
CTDSPL2-210ENST00000560834 IGHV5-10-1A0A0J9YXX1 117 aa6.77□□□□□ -1.33
CTDSPL2-210ENST00000560834 A0A0J9YY10 115 aa6.77□□□□□ -1.33
CTDSPL2-210ENST00000560834 ANKRD33BA6NCL7 494 aa6.77□□□□□ -1.33
CTDSPL2-210ENST00000560834 TLCD2A6NGC4 264 aa6.77□□□□□ -1.33
CTDSPL2-210ENST00000560834 ISM1B1AKI9 464 aa6.77□□□□□ -1.33
CTDSPL2-210ENST00000560834 E7EQ34 232 aa6.77□□□□□ -1.33
CTDSPL2-210ENST00000560834 K7EPI3 171 aa6.77□□□□□ -1.33
CTDSPL2-210ENST00000560834 CAPN5O15484 640 aaPredicted RBP6.77□□□□□ -1.33
CTDSPL2-210ENST00000560834 KIF1CO43896 1103 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-210ENST00000560834 PRAMEF4O60810 478 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms