RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 WASHC2DQ5SRD0 308 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 GARNL3Q5VVW2 1013 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 FCRL6Q6DN72 434 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 JMJD6Q6NYC1 403 aaPredicted RBP13.48□□□□□ -0.25
TPM1-223ENST00000560445 TTC27Q6P3X3 843 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 IGFL3Q6UXB1 125 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 SYDE1Q6ZW31 735 aaPredicted RBP13.48□□□□□ -0.25
TPM1-223ENST00000560445 CENPUQ71F23 418 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 OR2A1Q8NGT9 310 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 INPP5DQ92835 1189 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 OSBPL9Q96SU4 736 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 NUDT9Q9BW91 350 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 ZNF304Q9HCX3 659 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 C14orf105Q9NVL8 296 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 ZNF282Q9UDV7 671 aaPredicted RBP13.48□□□□□ -0.25
TPM1-223ENST00000560445 ASIC3Q9UHC3 531 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 CIDEBQ9UHD4 219 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 TRMT6Q9UJA5 497 aaKnown RBP13.48□□□□□ -0.25
TPM1-223ENST00000560445 PLAAQ9Y263 795 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 BSNQ9UPA5 3926 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 FLNCQ14315 2725 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 ANKRD12Q6UB98 2062 aa13.48□□□□□ -0.25
TPM1-223ENST00000560445 MED13Q9UHV7 2174 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 OR2A25A4D2G3 310 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 ARHGEF33A8MVX0 844 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 K7EM74 188 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 SORBS2O94875 1100 aaKnown RBP13.47□□□□□ -0.25
TPM1-223ENST00000560445 FDXRP22570 491 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 CCND1P24385 295 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 ITGA3P26006 1051 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 MAGEA3P43357 314 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 GCGRP47871 477 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 CLCN7P51798 805 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 TERF1P54274 439 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 MLLT10P55197 1068 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 ILF2Q12905 390 aaKnown RBP13.47□□□□□ -0.25
TPM1-223ENST00000560445 TSTA3Q13630 321 aaPredicted RBP13.47□□□□□ -0.25
TPM1-223ENST00000560445 SLC9A5Q14940 896 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 NDUFA9Q16795 377 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 TUBB8Q3ZCM7 444 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 ACSBG2Q5FVE4 666 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 THEMIS2Q5TEJ8 643 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 KIAA0408Q6ZU52 694 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 PPP1R32Q7Z5V6 425 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 COL26A1Q96A83 441 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 MS4A14Q96JA4 679 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 CABS1Q96KC9 395 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 DPH7Q9BTV6 452 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 FAM129AQ9BZQ8 928 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 ILKAPQ9H0C8 392 aaPredicted RBP13.47□□□□□ -0.25
TPM1-223ENST00000560445 TAS2R13Q9NYV9 303 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 FBXO5Q9UKT4 447 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 SNX12Q9UMY4 172 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 B3GNT3Q9Y2A9 372 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 KLHL20Q9Y2M5 609 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 DHRS7Q9Y394 339 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 FER1L5A0AVI2 2057 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 PCM1Q15154 2024 aa13.47□□□□□ -0.25
TPM1-223ENST00000560445 NUP210LQ5VU65 1888 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 A0A0J9YVX5 310 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 ZCWPW2A0A1B0GU75 182 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 GOLGA8MH3BSY2 632 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 HCRTR1O43613 425 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 SYF2O95926 243 aaKnown RBP13.46□□□□□ -0.25
TPM1-223ENST00000560445 EIF2S1P05198 315 aaKnown RBP13.46□□□□□ -0.25
TPM1-223ENST00000560445 C8GP07360 202 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 ANXA5P08758 320 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 FBLP22087 321 aaKnown RBP13.46□□□□□ -0.25
TPM1-223ENST00000560445 CXCR2P25025 360 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 SLC1A2P43004 574 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 PRDX1Q06830 199 aaKnown RBP13.46□□□□□ -0.25
TPM1-223ENST00000560445 SP140Q13342 867 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 NKG7Q16617 165 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 NADK2Q4G0N4 442 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.46□□□□□ -0.25
TPM1-223ENST00000560445 COLEC12Q5KU26 742 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 SPANXN3Q5MJ09 141 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 FHL5Q5TD97 284 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 AGAP7PQ5VUJ5 663 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 PRAMEF13Q5VWM6 474 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 ANKRD22Q5VYY1 191 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 ICE2Q659A1 982 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 SLC6A19Q695T7 634 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 KCNMB4Q86W47 210 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 REXO1L1PQ8IX06 675 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 FAM20CQ8IXL6 584 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 SLC35F6Q8N357 371 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 NAT8LQ8N9F0 302 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 MCOLN3Q8TDD5 553 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 ASB11Q8WXH4 323 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 SLCO2A1Q92959 643 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 FAM136AQ96C01 138 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 MIEF2Q96C03 454 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 AGAP4Q96P64 663 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 PLCD4Q9BRC7 762 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 CRB3Q9BUF7 120 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 EPS8L2Q9H6S3 715 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 MAP10Q9P2G4 905 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 TSR3Q9UJK0 312 aaKnown RBP13.46□□□□□ -0.25
TPM1-223ENST00000560445 FBXL4Q9UKA2 621 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms