RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 OVCH1Q7RTY7 1134 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 PIWIL4Q7Z3Z4 852 aaKnown RBP16.95■□□□□ 0.3
HDDC3-205ENST00000559898 PLD3Q8IV08 490 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 LRRC56Q8IYG6 542 aaPredicted RBP16.95■□□□□ 0.3
HDDC3-205ENST00000559898 CPNE9Q8IYJ1 553 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 CPT1CQ8TCG5 803 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 CD200R1Q8TD46 325 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 ZNF480Q8WV37 535 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 ZUFSPQ96AP4 578 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 C19orf60Q96EN9 201 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 FOPNLQ96NB1 174 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 SMAD5Q99717 465 aaKnown RBP16.95■□□□□ 0.3
HDDC3-205ENST00000559898 WDR83Q9BRX9 315 aaKnown RBP16.95■□□□□ 0.3
HDDC3-205ENST00000559898 RAB11FIP5Q9BXF6 653 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 ZNF552Q9H707 407 aaPredicted RBP16.95■□□□□ 0.3
HDDC3-205ENST00000559898 XAB2Q9HCS7 855 aaKnown RBP16.95■□□□□ 0.3
HDDC3-205ENST00000559898 INTS7Q9NVH2 962 aaKnown RBP16.95■□□□□ 0.3
HDDC3-205ENST00000559898 INTS10Q9NVR2 710 aaKnown RBP16.95■□□□□ 0.3
HDDC3-205ENST00000559898 CUEDC1Q9NWM3 386 aaPredicted RBP16.95■□□□□ 0.3
HDDC3-205ENST00000559898 GPR83Q9NYM4 423 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 FBXO5Q9UKT4 447 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 KLK4Q9Y5K2 254 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 CSAG2Q9Y5P2 127 aa16.95■□□□□ 0.3
HDDC3-205ENST00000559898 UTP20O75691 2785 aaKnown RBP16.94■□□□□ 0.3
HDDC3-205ENST00000559898 TARM1B6A8C7 271 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 H0YGG7 62 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 H3BMM5 538 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 FANCGO15287 622 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 SLC16A8O95907 504 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 ONECUT2O95948 504 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 ERVK-10P10266 1014 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 IVDP26440 423 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 CCNFP41002 786 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 ARF3P61204 181 aaPredicted RBP16.94■□□□□ 0.3
HDDC3-205ENST00000559898 THOC5Q13769 683 aaKnown RBP16.94■□□□□ 0.3
HDDC3-205ENST00000559898 UBAP2LQ14157 1087 aaKnown RBP16.94■□□□□ 0.3
HDDC3-205ENST00000559898 LONRF1Q17RB8 773 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 HKDC1Q2TB90 917 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 PLEKHN1Q494U1 663 aaPredicted RBP16.94■□□□□ 0.3
HDDC3-205ENST00000559898 ZC3H12BQ5HYM0 836 aaKnown RBP16.94■□□□□ 0.3
HDDC3-205ENST00000559898 RBM20Q5T481 1227 aaKnown RBP16.94■□□□□ 0.3
HDDC3-205ENST00000559898 MBOAT1Q6ZNC8 495 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 PAQR7Q86WK9 346 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 PRSS58Q8IYP2 241 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 GALNT16Q8N428 558 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 INPP5DQ92835 1189 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 PTERQ96BW5 349 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 TAC3Q9UHF0 121 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 ADAMTS6Q9UKP5 1117 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 SH2B3Q9UQQ2 575 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 ZNF451Q9Y4E5 1061 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 MAP4K5Q9Y4K4 846 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 HS3ST3B1Q9Y662 390 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 FAM169AQ9Y6X4 670 aa16.94■□□□□ 0.3
HDDC3-205ENST00000559898 PTPN13Q12923 2485 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 HYKKA2RU49 373 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 E7ENX8 843 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 P2RX6O15547 441 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 SYF2O95926 243 aaKnown RBP16.93■□□□□ 0.3
HDDC3-205ENST00000559898 FNTAP49354 379 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 EFNA3P52797 238 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 PNLIPRP1P54315 467 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 ARSFP54793 590 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 TAP2Q03519 686 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 GRM7Q14831 915 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 LAPTM4BQ86VI4 370 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 KCNMB4Q86W47 210 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 PPIL6Q8IXY8 311 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 ASB11Q8WXH4 323 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 CAPZA3Q96KX2 299 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 PLCD4Q9BRC7 762 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 AARSD1Q9BTE6 412 aaKnown RBP16.93■□□□□ 0.3
HDDC3-205ENST00000559898 MRPS30Q9NP92 439 aaKnown RBP16.93■□□□□ 0.3
HDDC3-205ENST00000559898 ENAMQ9NRM1 1142 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 FBXL4Q9UKA2 621 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 DHRS7Q9Y394 339 aa16.93■□□□□ 0.3
HDDC3-205ENST00000559898 MRPS2Q9Y399 296 aaKnown RBP16.93■□□□□ 0.3
HDDC3-205ENST00000559898 MAGEB16A2A368 324 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 VSTM2BA6NLU5 285 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 GFYI3L273 518 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 DNALI1O14645 258 aaPredicted RBP16.92■□□□□ 0.3
HDDC3-205ENST00000559898 HAT1O14929 419 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 NRDCO43847 1150 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 RNF224P0DH78 156 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 CMPK1P30085 196 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 RRADP55042 308 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 CDKN2DP55273 166 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 Q0VFX4 171 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 PTK6Q13882 451 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 CRYMQ14894 314 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 PPP1R7Q15435 360 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 INPP5JQ15735 1006 aaPredicted RBP16.92■□□□□ 0.3
HDDC3-205ENST00000559898 PRTGQ2VWP7 1150 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 VWA2Q5GFL6 755 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 TCTE1Q5JU00 501 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 ICE2Q659A1 982 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 ZNF425Q6IV72 752 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 KIRREL2Q6UWL6 708 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 ARHGEF39Q8N4T4 335 aa16.92■□□□□ 0.3
HDDC3-205ENST00000559898 TTC29Q8NA56 475 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms