RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SLC22A14Q9Y267 594 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 MSRB2Q9Y3D2 182 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 IGF2RP11717 2491 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 A0A1B0GTL3 188 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 OR2A25A4D2G3 310 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 C1QTNF9BB2RNN3 333 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 G3V2L1 256 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 MATN2O00339 956 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 MAP2K7O14733 419 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 HGSO14964 777 aaPredicted RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 TOX3O15405 576 aaPredicted RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 ZBTB11O95625 1053 aaPredicted RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 STATHP02808 62 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 MT-ND3P03897 115 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 PROCP04070 461 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 C1QTNF9P0C862 333 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 COL6A2P12110 1019 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 CDH1P12830 882 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 KRT15P19012 456 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 KRT4P19013 534 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 CD22P20273 847 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 VARSP26640 1264 aaKnown RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 RPA3P35244 121 aaPredicted RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 GGT5P36269 586 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 MEF2AQ02078 507 aaPredicted RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 PRDX1Q06830 199 aaKnown RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 MPP2Q14168 576 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 RTP5Q14D33 572 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 FAM83EQ2M2I3 478 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 CATSPEREQ5SY80 951 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 FRMPD2BQ6IN97 320 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 ADNP2Q6IQ32 1131 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 FRA10AC1Q70Z53 315 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 CCDC91Q7Z6B0 441 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 THOC6Q86W42 341 aaKnown RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 PAQR7Q86WK9 346 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 FAM129CQ86XR2 697 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 SRRM1Q8IYB3 904 aaKnown RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 SHISA5Q8N114 240 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 RIBC1Q8N443 379 aaPredicted RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 DNAJC22Q8N4W6 341 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 BANPQ8N9N5 519 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 AGBL5Q8NDL9 886 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 ZNF740Q8NDX6 193 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 OR1L3Q8NH93 324 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 STAG3L4Q8TBR4 150 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 MDM1Q8TC05 714 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 ACMSDQ8TDX5 336 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 UBTD2Q8WUN7 234 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 NEIL2Q969S2 332 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 ZNF501Q96CX3 271 aaPredicted RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 TSNARE1Q96NA8 513 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 EGFL8Q99944 293 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 DPYSL5Q9BPU6 564 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 DPH7Q9BTV6 452 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 ROPN1BQ9BZX4 212 aaPredicted RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 PPCSQ9HAB8 311 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 ROPN1Q9HAT0 212 aaPredicted RBP10.47□□□□□ -0.73
TPM1-217ENST00000559108 NUDT4Q9NZJ9 180 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 CD274Q9NZQ7 290 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 SLC17A7Q9P2U7 560 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 PCDHB11Q9Y5F2 797 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 KLK4Q9Y5K2 254 aa10.47□□□□□ -0.73
TPM1-217ENST00000559108 CHD8Q9HCK8 2581 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 UQCRHLA0A096LP55 91 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 LOC105369274A0A096LPK9 316 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 LOC102723532A0A0G2JNH3 316 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 TEX51A0A1B0GUA7 166 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 A8MT66 165 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 CDRT15L2A8MXV6 281 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 B4E171 279 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 PPP6CO00743 305 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 HAT1O14929 419 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 ZW10O43264 779 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 TYROBPO43914 113 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 BRINP1O60477 761 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 DLX3O60479 287 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 PLIN3O60664 434 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 SPAG7O75391 227 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 ERLIN1O75477 346 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 WDR47O94967 919 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 TNFSF15O95150 251 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 UQCRHP07919 91 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 ANXA5P08758 320 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 HIST1H2AGP0C0S8 130 aaPredicted RBP10.46□□□□□ -0.73
TPM1-217ENST00000559108 HIST1H2ADP20671 130 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 TSPAN7P41732 249 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 GCGRP47871 477 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 MAPK10P53779 464 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 CSNK1G2P78368 415 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 HSD11B2P80365 405 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 MC2RQ01718 297 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 SETDB1Q15047 1291 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 PFKFB4Q16877 469 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 LGSNQ5TDP6 509 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 FBXO42Q6P3S6 717 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 FIGLAQ6QHK4 219 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 LCTLQ6UWM7 567 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 LRIG3Q6UXM1 1119 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 RNF44Q7L0R7 432 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms