RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 RNF44Q7L0R7 432 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 ADAMTSL2Q86TH1 951 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 PAQR7Q86WK9 346 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 SYTL1Q8IYJ3 562 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 ARHGEF39Q8N4T4 335 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 MREGQ8N565 214 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 PDPRQ8NCN5 879 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 MCOLN3Q8TDD5 553 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 RHBDF1Q96CC6 855 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 ZNF578Q96N58 590 aaPredicted RBP10.99□□□□□ -0.65
SNX1-204ENST00000559061 ZNF285Q96NJ3 590 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 B3GNT4Q9C0J1 378 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 SPNS1Q9H2V7 528 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 ALG9Q9H6U8 611 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 ENAMQ9NRM1 1142 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 FGF21Q9NSA1 209 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 ARL15Q9NXU5 204 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 PCDHB11Q9Y5F2 797 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 ACACAQ13085 2346 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 PCSK5Q92824 1860 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 LOC400499M0QZD8 3231 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 A0A087X1B8 175 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 A0A1W2PPM1 405 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 UBXN8O00124 270 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 TERTO14746 1132 aaKnown RBP10.98□□□□□ -0.65
SNX1-204ENST00000559061 KDM1AO60341 852 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 KLHL2O95198 593 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 LTA4HP09960 611 aaKnown RBP10.98□□□□□ -0.65
SNX1-204ENST00000559061 NPPBP16860 134 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 WT1P19544 449 aaPredicted RBP10.98□□□□□ -0.65
SNX1-204ENST00000559061 ITGAXP20702 1163 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 HSD17B2P37059 387 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 SLC26A3P40879 764 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 EIF2S3P41091 472 aaKnown RBP10.98□□□□□ -0.65
SNX1-204ENST00000559061 GDF5P43026 501 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 SLCO1A2P46721 670 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 GLRBP48167 497 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 ATP6V0D1P61421 351 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 TUBB4BP68371 445 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 PRDX1Q06830 199 aaKnown RBP10.98□□□□□ -0.65
SNX1-204ENST00000559061 FOXM1Q08050 763 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 SF1Q15637 639 aaKnown RBP10.98□□□□□ -0.65
SNX1-204ENST00000559061 PTCHD3Q3KNS1 767 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 PRAMEF13Q5VWM6 474 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 FAM219BQ5XKK7 198 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 FRMPD2BQ6IN97 320 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 LCN10Q6JVE6 187 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 FBXO42Q6P3S6 717 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 RAPH1Q70E73 1250 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 TDRPQ86YL5 185 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 LSMEM2Q8N112 164 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 DTWD1Q8N5C7 304 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 ESAMQ96AP7 390 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 PLCD4Q9BRC7 762 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 DPH7Q9BTV6 452 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 SPRTNQ9H040 489 aaPredicted RBP10.98□□□□□ -0.65
SNX1-204ENST00000559061 AKIRIN1Q9H9L7 192 aaPredicted RBP10.98□□□□□ -0.65
SNX1-204ENST00000559061 SOHLH2Q9NX45 425 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 PSMC3IPQ9P2W1 217 aaPredicted RBP10.98□□□□□ -0.65
SNX1-204ENST00000559061 LNPEPQ9UIQ6 1025 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 PTBP2Q9UKA9 531 aaKnown RBP10.98□□□□□ -0.65
SNX1-204ENST00000559061 ZMIZ1Q9ULJ6 1067 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 ACOT9Q9Y305 439 aa10.98□□□□□ -0.65
SNX1-204ENST00000559061 TMEM184BQ9Y519 407 aaPredicted RBP10.98□□□□□ -0.65
SNX1-204ENST00000559061 LOC105369274A0A096LPK9 316 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 LOC102723532A0A0G2JNH3 316 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 TMEM8BA6NDV4 472 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 LRRC14BA6NHZ5 514 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 NCF1BA6NI72 391 aaPredicted RBP10.97□□□□□ -0.65
SNX1-204ENST00000559061 NCF1CA8MVU1 366 aaPredicted RBP10.97□□□□□ -0.65
SNX1-204ENST00000559061 TARM1B6A8C7 271 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 TMEM150CB9EJG8 249 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 HAT1O14929 419 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 POLR1CO15160 346 aaPredicted RBP10.97□□□□□ -0.65
SNX1-204ENST00000559061 EFSO43281 561 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 KLK8O60259 260 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 KERAO60938 352 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 STK17BO94768 372 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 SNRPAP09012 282 aaKnown RBP10.97□□□□□ -0.65
SNX1-204ENST00000559061 NCF1P14598 390 aaPredicted RBP10.97□□□□□ -0.65
SNX1-204ENST00000559061 CNTFP26441 200 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 RBMS1P29558 406 aaKnown RBP10.97□□□□□ -0.65
SNX1-204ENST00000559061 TYK2P29597 1187 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 RPA3P35244 121 aaPredicted RBP10.97□□□□□ -0.65
SNX1-204ENST00000559061 RORAP35398 523 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 GGT5P36269 586 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 AGTR2P50052 363 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 RAB15P59190 212 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 IL11RAQ14626 422 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 RASA2Q15283 850 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.97□□□□□ -0.65
SNX1-204ENST00000559061 DCAF12Q5T6F0 453 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 ZNF385CQ66K41 422 aaPredicted RBP10.97□□□□□ -0.65
SNX1-204ENST00000559061 LCTLQ6UWM7 567 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 PLD3Q8IV08 490 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 TMEM151BQ8IW70 566 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 OR4N4Q8N0Y3 316 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 SHISA5Q8N114 240 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 FGF11Q92914 225 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 SLC22A18Q96BI1 424 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms