RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 MMD2Q8IY49 270 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 NCOA7Q8NI08 942 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 CD101Q93033 1021 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 CENPTQ96BT3 561 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 SNRNP40Q96DI7 357 aaKnown RBP4.08□□□□□ -1.76
CASC4-206ENST00000558847 ST6GAL2Q96JF0 529 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 HNRNPABQ99729 332 aaKnown RBP4.08□□□□□ -1.76
CASC4-206ENST00000558847 CDK19Q9BWU1 502 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 ZNF350Q9GZX5 532 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 ACTL8Q9H568 366 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 TFB2MQ9H5Q4 396 aaKnown RBP4.08□□□□□ -1.76
CASC4-206ENST00000558847 DBNDD1Q9H9R9 158 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 LRRC4Q9HBW1 653 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 PKD2L2Q9NZM6 624 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 DAPK2Q9UIK4 370 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 MAN1B1Q9UKM7 699 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 TMED3Q9Y3Q3 217 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 KNSTRNQ9Y448 316 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 IL16Q14005 1332 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 LOC101059948A0A1B0GTJ6 334 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 A0A1W2PPK0 400 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 ILVBLA1L0T0 632 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 SMTNL1A8MU46 457 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 TMEM150CB9EJG8 249 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 SELENOFO60613 162 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 MOCS2O96007 188 aaPredicted RBP4.07□□□□□ -1.76
CASC4-206ENST00000558847 GSRP00390 522 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 PLGP00747 810 aaPredicted RBP4.07□□□□□ -1.76
CASC4-206ENST00000558847 GH1P01241 217 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 IGHV4-38-2P0DP08 117 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 AMD1P17707 334 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 JAK1P23458 1154 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 TNFRSF8P28908 595 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 CSTF2P33240 577 aaKnown RBP eCLIP4.07□□□□□ -1.76
CASC4-206ENST00000558847 GLIPR1P48060 266 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 GMPSP49915 693 aaPredicted RBP4.07□□□□□ -1.76
CASC4-206ENST00000558847 CDH11P55287 796 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 ZNF415Q09FC8 603 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 COASYQ13057 564 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 CCDC6Q16204 474 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 SLC35D3Q5M8T2 416 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 C20orf194Q5TEA3 1177 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 ZNF324BQ6AW86 544 aaPredicted RBP4.07□□□□□ -1.76
CASC4-206ENST00000558847 CAPRIN2Q6IMN6 1127 aaKnown RBP4.07□□□□□ -1.76
CASC4-206ENST00000558847 SLC27A1Q6PCB7 646 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 RFLNBQ8N5W9 214 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 ANKRD13CQ8N6S4 541 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 OR13A1Q8NGR1 328 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 OR52N5Q8NH56 324 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 GRHL3Q8TE85 626 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 CKAP2Q8WWK9 683 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 TSACCQ96A04 125 aaPredicted RBP4.07□□□□□ -1.76
CASC4-206ENST00000558847 FAM20AQ96MK3 541 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 SLC2A11Q9BYW1 496 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 LSG1Q9H089 658 aaKnown RBP4.07□□□□□ -1.76
CASC4-206ENST00000558847 SDCBP2Q9H190 292 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 S1PR5Q9H228 398 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 PDRG1Q9NUG6 133 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 PTTG2Q9NZH5 202 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 TRPC4Q9UBN4 977 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 STUB1Q9UNE7 303 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 FAF1Q9UNN5 650 aaPredicted RBP4.07□□□□□ -1.76
CASC4-206ENST00000558847 PROCRQ9UNN8 238 aa4.07□□□□□ -1.76
CASC4-206ENST00000558847 PA2G4Q9UQ80 394 aaKnown RBP4.07□□□□□ -1.76
CASC4-206ENST00000558847 FAM149AA5PLN7 773 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 DDX39AO00148 427 aaKnown RBP4.06□□□□□ -1.76
CASC4-206ENST00000558847 KRT36O76013 467 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 SLC16A8O95907 504 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 APOHP02749 345 aaPredicted RBP4.06□□□□□ -1.76
CASC4-206ENST00000558847 GP1BBP13224 206 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 LIFP15018 202 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 PAX1P15863 534 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 STMN1P16949 149 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 CA4P22748 312 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 CCND3P30281 292 aaPredicted RBP4.06□□□□□ -1.76
CASC4-206ENST00000558847 CETN2P41208 172 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 CASP3P42574 277 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 GAS1P54826 345 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 GSDMDP57764 484 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 IL10RBQ08334 325 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 LYSMD4Q5XG99 296 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 PRSS57Q6UWY2 283 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 GDPD4Q6W3E5 623 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 GPR141Q7Z602 305 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 ISCA2Q86U28 154 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 DNAJC22Q8N4W6 341 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 CCDC63Q8NA47 563 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 UXS1Q8NBZ7 420 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 OR11H4Q8NGC9 324 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 CCDC47Q96A33 483 aaKnown RBP4.06□□□□□ -1.76
CASC4-206ENST00000558847 PYCR2Q96C36 320 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 KLHL5Q96PQ7 755 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 MAP3K3Q99759 626 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 ATG101Q9BSB4 218 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 RHNO1Q9BSD3 238 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 SLC5A7Q9GZV3 580 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 LAT2Q9GZY6 243 aa4.06□□□□□ -1.76
CASC4-206ENST00000558847 FAM49AQ9H0Q0 323 aaPredicted RBP4.06□□□□□ -1.76
CASC4-206ENST00000558847 RETREG1Q9H6L5 497 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms