RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	OTX2	P32243	289 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	CCR7	P32248	378 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	NSG1	P42857	185 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	PGD	P52209	483 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	CRADD	P78560	199 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	RPA4	Q13156	261 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	ATP1A4	Q13733	1029 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	SLC9A5	Q14940	896 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	OASL	Q15646	514 aa	Known RBP	6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	P3H1	Q32P28	736 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	PRR30	Q53SZ7	412 aa	Predicted RBP	6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	SEL1L2	Q5TEA6	688 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	MLIP	Q5VWP3	458 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	HIST2H2BC	Q6DN03	193 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	ZNF449	Q6P9G9	518 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	SPESP1	Q6UW49	350 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	FAM198B	Q6UWH4	519 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	PPP1R21	Q6ZMI0	780 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	ZNF534	Q76KX8	674 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	VRK3	Q8IV63	474 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	SYTL1	Q8IYJ3	562 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	CARF	Q8N187	725 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	KRT222	Q8N1A0	295 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	C19orf47	Q8N9M1	422 aa	Known RBP	6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	FDCSP	Q8NFU4	85 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	OR13J1	Q8NGT2	312 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	OR6P1	Q8NGX9	317 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	CFAP61	Q8NHU2	1237 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	FLVCR1-AS1	Q8TAF5	88 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	LKAAEAR1	Q8TD35	194 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	THAP4	Q8WY91	577 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	LRRC45	Q96CN5	670 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	DMRTB1	Q96MA1	342 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	IL17F	Q96PD4	163 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	PPP1R2P1	Q96PQ5	205 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	OSBPL9	Q96SU4	736 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	NAP1L3	Q99457	506 aa	Predicted RBP	6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	C19orf43	Q9BQ61	176 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	NUDT9	Q9BW91	350 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	NLN	Q9BYT8	704 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	SLC7A5P2	Q9GIP4	190 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	VPS37B	Q9H9H4	285 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	FANCE	Q9HB96	536 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	MARCH4	Q9P2E8	410 aa	Predicted RBP	6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	ANKMY1	Q9P2S6	941 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	RNF14	Q9UBS8	474 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	ZNF148	Q9UQR1	794 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	CDYL	Q9Y232	598 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	SAR1B	Q9Y6B6	198 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	NOTCH2	Q04721	2471 aa		6.74	□□□□□ -1.33
MARK3-215	ENST00000558787	CLEC18A	A5D8T8	446 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	ISM1	B1AKI9	464 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787		E7EQ34	232 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787		E7EVH7	732 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787		H3BMH7	237 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	MATN2	O00339	956 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	LIN7A	O14910	233 aa	Predicted RBP	6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	CNOT3	O75175	753 aa	Known RBP	6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	OR2B3	O76000	313 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	SUN1	O94901	812 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	AP2A2	O94973	939 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	FTH1	P02794	183 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	RAB40AL	P0C0E4	278 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	GNLY	P22749	145 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	MAPK1	P28482	360 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	SHMT2	P34897	504 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	RPL22	P35268	128 aa	Known RBP	6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	GRIA3	P42263	894 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	GABRA4	P48169	554 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	TERF1	P54274	439 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	SESN2	P58004	480 aa	Predicted RBP	6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	ID3	Q02535	119 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	HSPA14	Q0VDF9	509 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	CDH17	Q12864	832 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	NCF4	Q15080	339 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	WHAMMP3	Q1A5X7	153 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	SYTL3	Q4VX76	610 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	TSTD2	Q5T7W7	516 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	CES3	Q6UWW8	571 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	CLEC18B	Q6UXF7	455 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	LINC00523	Q86TU6	105 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	TAX1BP1	Q86VP1	789 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	HOOK3	Q86VS8	718 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	SLC13A5	Q86YT5	568 aa	Predicted RBP	6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	TBC1D21	Q8IYX1	336 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	ZNF655	Q8N720	491 aa	Predicted RBP	6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	CLEC18C	Q8NCF0	446 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	OR4L1	Q8NH43	312 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	MAIP1	Q8WWC4	291 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	LRFN5	Q96NI6	719 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	MLXIPL	Q9NP71	852 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	CASS4	Q9NQ75	786 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	CHRAC1	Q9NRG0	131 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	CRIM1	Q9NZV1	1036 aa		6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	DHCR7	Q9UBM7	475 aa	Known RBP	6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	TTC7A	Q9ULT0	858 aa	Predicted RBP	6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	RUVBL2	Q9Y230	463 aa	Known RBP	6.73	□□□□□ -1.33
MARK3-215	ENST00000558787	PTRH2	Q9Y3E5	179 aa	Known RBP	6.73	□□□□□ -1.33
MARK3-215	ENST00000558787		A0A0J9YY10	115 aa		6.72	□□□□□ -1.33
MARK3-215	ENST00000558787	HEATR9	A2RTY3	570 aa		6.72	□□□□□ -1.33

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms