RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 ARMC2Q8NEN0 867 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 YIPF2Q9BWQ6 316 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 TRABDQ9H4I3 376 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 GLOD4Q9HC38 313 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 TEKT2Q9UIF3 430 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 PKP3Q9Y446 797 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 LOC285095A0A1B0GVY8 99 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 A0A1W2PPR1 153 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 OR2W5A6NFC9 320 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 GABRR3A8MPY1 467 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 RASGRF2O14827 1237 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 TFECO14948 347 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-206ENST00000558739 HS6ST1O60243 411 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 SLC25A12O75746 678 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 PDE9AO76083 593 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 MX2P20592 715 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 ACADLP28330 430 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 PKLRP30613 574 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 CD68P34810 354 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-206ENST00000558739 DCAF7P61962 342 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 XIAPP98170 497 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 MAT1AQ00266 395 aaKnown RBP11.21□□□□□ -0.61
SMAD3-206ENST00000558739 OC90Q02509 493 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-206ENST00000558739 KIR2DS3Q14952 304 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 BTBD16Q32M84 506 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 TCTE1Q5JU00 501 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 FIGLAQ6QHK4 219 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 TMEM205Q6UW68 189 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 NPNTQ6UXI9 565 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 CLEC17AQ6ZS10 378 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 ZNF227Q86WZ6 799 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 MLKLQ8NB16 471 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 DENND1AQ8TEH3 1009 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 SLCO2A1Q92959 643 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 FAF2Q96CS3 445 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 DCUN1D1Q96GG9 259 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 OXNAD1Q96HP4 312 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-206ENST00000558739 MRGPRX2Q96LB1 330 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 ZNF670Q9BS34 389 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 MENTQ9BUN1 341 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 THAP2Q9H0W7 228 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 TP63Q9H3D4 680 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-206ENST00000558739 SLC24A3Q9HC58 644 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 NEUROD4Q9HD90 331 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 ENAMQ9NRM1 1142 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 ZC3H7BQ9UGR2 993 aaKnown RBP11.21□□□□□ -0.61
SMAD3-206ENST00000558739 HEY1Q9Y5J3 304 aa11.21□□□□□ -0.61
SMAD3-206ENST00000558739 HEATR5BQ9P2D3 2071 aa11.21□□□□□ -0.62
SMAD3-206ENST00000558739 A0A0G2JNJ9 132 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 A0A0J9YVX5 310 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 KRT87PA6NCN2 255 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 NME2P1O60361 137 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 EIF2S1P05198 315 aaKnown RBP11.2□□□□□ -0.62
SMAD3-206ENST00000558739 ATP1B2P14415 290 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-206ENST00000558739 CD53P19397 219 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 NME2P22392 152 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 EEF1GP26641 437 aaKnown RBP11.2□□□□□ -0.62
SMAD3-206ENST00000558739 PSMB5P28074 263 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 ADH7P40394 386 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 SSR1P43307 286 aaKnown RBP11.2□□□□□ -0.62
SMAD3-206ENST00000558739 UBE2HP62256 183 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 SLC14A2Q15849 920 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 TMEM211Q6ICI0 200 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 SLC25A25Q6KCM7 469 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 CCDC70Q6NSX1 233 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 H3F3CQ6NXT2 135 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 UNC5DQ6UXZ4 953 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 ZNF571Q7Z3V5 609 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-206ENST00000558739 CXorf67Q86X51 503 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-206ENST00000558739 NEK11Q8NG66 645 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 OR4K2Q8NGD2 314 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 OR5M3Q8NGP4 307 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 OR5K2Q8NHB8 316 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 TMEM125Q96AQ2 219 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 ZNF354BQ96LW1 612 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 TUBB6Q9BUF5 446 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 PLEKHF2Q9H8W4 249 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMAD3-206ENST00000558739 IL1RAPL1Q9NZN1 696 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 Q9UFV3 132 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 CRLS1Q9UJA2 301 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 MKL2Q9ULH7 1088 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 SCINQ9Y6U3 715 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 USF3Q68DE3 2245 aa11.2□□□□□ -0.62
SMAD3-206ENST00000558739 A0A0A6YYK5 440 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-206ENST00000558739 AGAP14A8MT82 685 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 DDX3XO00571 662 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMAD3-206ENST00000558739 STX7O15400 261 aaKnown RBP11.19□□□□□ -0.62
SMAD3-206ENST00000558739 C8orf89P0DMQ9 161 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 NFKB1P19838 968 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 ANP32AP39687 249 aaKnown RBP11.19□□□□□ -0.62
SMAD3-206ENST00000558739 TAS2R40P59535 323 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 RPA4Q13156 261 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 SLC1A5Q15758 541 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 TAZQ16635 292 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 FAM214AQ32MH5 1076 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 PLAG1Q6DJT9 500 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 PRMT9Q6P2P2 845 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 C16orf47Q6ZP98 133 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-206ENST00000558739 NIPA2Q8N8Q9 360 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms