RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 IQCA1Q86XH1 822 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 ELP5Q8TE02 316 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 TMEM170AQ8WVE7 144 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 PRPF31Q8WWY3 499 aaKnown RBP5.69□□□□□ -1.5
RTF1-204ENST00000558117 PIBF1Q8WXW3 757 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 HTRA1Q92743 480 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 C6orf106Q9H6K1 298 aaPredicted RBP5.69□□□□□ -1.5
RTF1-204ENST00000558117 PLEKHA5Q9HAU0 1116 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 SELENONQ9NZV5 590 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 PEMTQ9UBM1 199 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 PCDHGB5Q9Y5G0 923 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 MYH9P35579 1960 aaKnown RBP5.69□□□□□ -1.5
RTF1-204ENST00000558117 IGLV3-22A0A075B6J6 115 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 A0A1B0GVM2 712 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 CBY3A6NI87 242 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 TEX22C9J3V5 150 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 FAM86B1E9PN63 330 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 YKT6O15498 198 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 ASAP2O43150 1006 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 B4GALT5O43286 388 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 FAM86B2P0C5J1 330 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 ATF6P18850 670 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 KRT9P35527 623 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 GGT5P36269 586 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 CXCR3P49682 368 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 CRYZQ08257 329 aaKnown RBP5.68□□□□□ -1.5
RTF1-204ENST00000558117 Q0VFX4 171 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 LAMTOR4Q0VGL1 99 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 GPR17Q13304 367 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 ZNF766Q5HY98 468 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 SLC27A1Q6PCB7 646 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 NEK10Q6ZWH5 1172 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 MON1BQ7L1V2 547 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 LSMEM1Q8N8F7 131 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 ATAD1Q8NBU5 361 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 NEXN-AS1Q8NBZ9 246 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 ZMIZ2Q8NF64 920 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 TNIP2Q8NFZ5 429 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 WDR36Q8NI36 951 aaKnown RBP5.68□□□□□ -1.5
RTF1-204ENST00000558117 TMEM163Q8TC26 289 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 NEUROG1Q92886 237 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 MED30Q96HR3 178 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 SLC22A12Q96S37 553 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 CYP2S1Q96SQ9 504 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 BARD1Q99728 777 aaKnown RBP5.68□□□□□ -1.5
RTF1-204ENST00000558117 CHCHD6Q9BRQ6 235 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 NUP58Q9BVL2 599 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 INTS2Q9H0H0 1204 aaKnown RBP5.68□□□□□ -1.5
RTF1-204ENST00000558117 WDR26Q9H7D7 661 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 ANKEF1Q9NU02 776 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 IL1RAPL1Q9NZN1 696 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 SLC13A4Q9UKG4 626 aa5.68□□□□□ -1.5
RTF1-204ENST00000558117 GOLGA6L10A0A0M3HER8 536 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 A0A1B0GUA9 196 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 MTMR11A4FU01 709 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 A6NLC8 198 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 TCP11X1B4DZS4 312 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 K7EM74 188 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 PLOD3O60568 738 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 TBX18O95935 607 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 PRSS2P07478 247 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 ACAA1P09110 424 aaPredicted RBP5.67□□□□□ -1.5
RTF1-204ENST00000558117 ATP1A3P13637 1013 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 HMGA1P17096 107 aaKnown RBP5.67□□□□□ -1.5
RTF1-204ENST00000558117 NR1D1P20393 614 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 EDN2P20800 178 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 CD27P26842 260 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 RYKP34925 604 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 LIFRP42702 1097 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 GPD2P43304 727 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 C21orf59P57076 290 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 KRTAP10-9P60411 292 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 PTENP60484 403 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 ZBED6P86452 979 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 GALNT2Q10471 571 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 KIF26BQ2KJY2 2108 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 ZC2HC1CQ53FD0 456 aaPredicted RBP5.67□□□□□ -1.5
RTF1-204ENST00000558117 XKR3Q5GH77 459 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 ITPRIPL1Q6GPH6 555 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 RHBDF2Q6PJF5 856 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 CRELD2Q6UXH1 353 aaPredicted RBP5.67□□□□□ -1.5
RTF1-204ENST00000558117 DSTYKQ6XUX3 929 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 PLA2G4DQ86XP0 818 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 SPATA2LQ8IUW3 424 aaPredicted RBP5.67□□□□□ -1.5
RTF1-204ENST00000558117 RNF149Q8NC42 400 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 LRRC15Q8TF66 581 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 RNF183Q96D59 192 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 APOPT1Q96IL0 206 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 FUZQ9BT04 418 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 HEMGNQ9BXL5 484 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 IL36RNQ9UBH0 155 aa5.67□□□□□ -1.5
RTF1-204ENST00000558117 KMT2CQ8NEZ4 4911 aaKnown RBP5.67□□□□□ -1.5
RTF1-204ENST00000558117 NUMA1Q14980 2115 aa5.66□□□□□ -1.5
RTF1-204ENST00000558117 POLEQ07864 2286 aa5.66□□□□□ -1.5
RTF1-204ENST00000558117 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.66□□□□□ -1.5
RTF1-204ENST00000558117 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.66□□□□□ -1.5
RTF1-204ENST00000558117 F5H0A9 414 aaPredicted RBP5.66□□□□□ -1.5
RTF1-204ENST00000558117 GUCY1B2O75343 617 aa5.66□□□□□ -1.5
RTF1-204ENST00000558117 SOX30O94993 753 aa5.66□□□□□ -1.5
RTF1-204ENST00000558117 GP1BAP07359 652 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms