RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 TBC1D25Q3MII6 688 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 PRAMEF13Q5VWM6 474 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 CLEC14AQ86T13 490 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 OR56A3Q8NH54 315 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 RHEBL1Q8TAI7 183 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 MZB1Q8WU39 189 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 EXT2Q93063 718 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 ZUFSPQ96AP4 578 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 RHBDF1Q96CC6 855 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 B3GNT4Q9C0J1 378 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 CD274Q9NZQ7 290 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 B3GALT1Q9Y5Z6 326 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 CHD8Q9HCK8 2581 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 FRYQ5TBA9 3013 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 TLDC2A0PJX2 215 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 CCDC189A1A4V9 331 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 TARM1B6A8C7 271 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 ABATP80404 500 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 CDKL4Q5MAI5 379 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 FCRL6Q6DN72 434 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 TSNARE1Q96NA8 513 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 TEFMQ96QE5 360 aaKnown RBP24.57■■□□□ 1.52
SMAD6-202ENST00000557916 ATOH8Q96SQ7 321 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 DPH7Q9BTV6 452 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 PCMTD2Q9NV79 361 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 ZNF358Q9NW07 568 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 EURLQ9NYK6 297 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 RARRES3Q9UL19 164 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 PLAAQ9Y263 795 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 KLK4Q9Y5K2 254 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 WDFY3Q8IZQ1 3526 aa24.57■■□□□ 1.52
SMAD6-202ENST00000557916 MT-ND3P03897 115 aa24.56■■□□□ 1.52
SMAD6-202ENST00000557916 S100BP04271 92 aaPredicted RBP24.56■■□□□ 1.52
SMAD6-202ENST00000557916 CAPNS1P04632 268 aa24.56■■□□□ 1.52
SMAD6-202ENST00000557916 NAA25Q14CX7 972 aa24.56■■□□□ 1.52
SMAD6-202ENST00000557916 TSNAXIP1Q2TAA8 658 aa24.56■■□□□ 1.52
SMAD6-202ENST00000557916 PTCHD3Q3KNS1 767 aa24.56■■□□□ 1.52
SMAD6-202ENST00000557916 LCTLQ6UWM7 567 aa24.56■■□□□ 1.52
SMAD6-202ENST00000557916 CYP4X1Q8N118 509 aa24.56■■□□□ 1.52
SMAD6-202ENST00000557916 ZNF501Q96CX3 271 aaPredicted RBP24.56■■□□□ 1.52
SMAD6-202ENST00000557916 ZPBPQ9BS86 351 aa24.56■■□□□ 1.52
SMAD6-202ENST00000557916 ROPN1BQ9BZX4 212 aaPredicted RBP24.56■■□□□ 1.52
SMAD6-202ENST00000557916 ROPN1Q9HAT0 212 aaPredicted RBP24.56■■□□□ 1.52
SMAD6-202ENST00000557916 FANCEQ9HB96 536 aa24.56■■□□□ 1.52
SMAD6-202ENST00000557916 SLC6A20Q9NP91 592 aa24.56■■□□□ 1.52
SMAD6-202ENST00000557916 FOXJ2Q9P0K8 574 aa24.56■■□□□ 1.52
SMAD6-202ENST00000557916 ASPMQ8IZT6 3477 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 ADAMTS20P59510 1910 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 SUPT3HB4E1H0 165 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 SUPT3HO75486 399 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 MSL3P1P0C860 447 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 FGF5P12034 268 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 KRT15P19012 456 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 C18orf21Q32NC0 220 aaPredicted RBP24.55■■□□□ 1.52
SMAD6-202ENST00000557916 SULT1C3Q6IMI6 304 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 BPHLQ86WA6 291 aaPredicted RBP24.55■■□□□ 1.52
SMAD6-202ENST00000557916 PPP1R3BQ86XI6 285 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 TCAIMQ8N3R3 496 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 DNAJC22Q8N4W6 341 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 ACMSDQ8TDX5 336 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 HAUS8Q9BT25 410 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 WWOXQ9NZC7 414 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 NUDT4Q9NZJ9 180 aa24.55■■□□□ 1.52
SMAD6-202ENST00000557916 SNRNP200O75643 2136 aaKnown RBP24.55■■□□□ 1.52
SMAD6-202ENST00000557916 IGKV1-8A0A0C4DH67 115 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 A0A1W2PPM1 405 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 CCDC151A5D8V7 595 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 SYCE1LA8MT33 242 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 TMEM150CB9EJG8 249 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 GOLGA8RI6L899 631 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 UBXN8O00124 270 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 RBP1P09455 135 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 NPPBP16860 134 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 DEFB110Q30KQ9 67 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 RIBC1Q8N443 379 aaPredicted RBP24.54■■□□□ 1.52
SMAD6-202ENST00000557916 PDPRQ8NCN5 879 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 N4BP2L2Q92802 583 aaPredicted RBP24.54■■□□□ 1.52
SMAD6-202ENST00000557916 FGF11Q92914 225 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 SCYL1Q96KG9 808 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 CUEDC1Q9NWM3 386 aaPredicted RBP24.54■■□□□ 1.52
SMAD6-202ENST00000557916 ANKMY1Q9P2S6 941 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 SNX7Q9UNH6 387 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 PCM1Q15154 2024 aa24.54■■□□□ 1.52
SMAD6-202ENST00000557916 FOXO6A8MYZ6 492 aa24.53■■□□□ 1.52
SMAD6-202ENST00000557916 TAPBPO15533 448 aa24.53■■□□□ 1.52
SMAD6-202ENST00000557916 PYGBP11216 843 aa24.53■■□□□ 1.52
SMAD6-202ENST00000557916 GABRA4P48169 554 aa24.53■■□□□ 1.52
SMAD6-202ENST00000557916 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.53■■□□□ 1.52
SMAD6-202ENST00000557916 TECRLQ5HYJ1 363 aa24.53■■□□□ 1.52
SMAD6-202ENST00000557916 THOC6Q86W42 341 aaKnown RBP24.53■■□□□ 1.52
SMAD6-202ENST00000557916 C17orf64Q86WR6 236 aa24.53■■□□□ 1.52
SMAD6-202ENST00000557916 OR8K5Q8NH50 307 aa24.53■■□□□ 1.52
SMAD6-202ENST00000557916 OR4K3Q96R72 315 aa24.53■■□□□ 1.52
SMAD6-202ENST00000557916 PLCD4Q9BRC7 762 aa24.53■■□□□ 1.52
SMAD6-202ENST00000557916 CNOT10Q9H9A5 744 aaKnown RBP24.53■■□□□ 1.52
SMAD6-202ENST00000557916 PTBP2Q9UKA9 531 aaKnown RBP24.53■■□□□ 1.52
SMAD6-202ENST00000557916 PLCL2Q9UPR0 1127 aa24.53■■□□□ 1.52
SMAD6-202ENST00000557916 SLC22A14Q9Y267 594 aa24.53■■□□□ 1.52
SMAD6-202ENST00000557916 FREM2Q5SZK8 3169 aa24.53■■□□□ 1.52
SMAD6-202ENST00000557916 OR2A25A4D2G3 310 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms