RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 OLFM3Q96PB7 478 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 IP6K3Q96PC2 410 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 FANCD2OSQ96PS1 177 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 TUBGCP5Q96RT8 1024 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 CPXM1Q96SM3 734 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 GORASP1Q9BQQ3 440 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 BTBD10Q9BSF8 475 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 FAM167BQ9BTA0 163 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 SSBP4Q9BWG4 385 aaPredicted RBP6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 YIPF2Q9BWQ6 316 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 NLNQ9BYT8 704 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 WNT10AQ9GZT5 417 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 VPS11Q9H270 941 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 CHST8Q9H2A9 424 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 CXXC4Q9H2H0 198 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 DENND2DQ9H6A0 471 aaPredicted RBP6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 ZNF552Q9H707 407 aaPredicted RBP6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 ATP13A3Q9H7F0 1226 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 NDUFA13Q9P0J0 144 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 STX18Q9P2W9 335 aaKnown RBP6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 CPNE7Q9UBL6 633 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 ANAPC5Q9UJX4 755 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 NOCTQ9UK39 431 aaKnown RBP6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 PPT2Q9UMR5 302 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 PCDHB14Q9Y5E9 798 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 PCM1Q15154 2024 aa6.62□□□□□ -1.35
SPTLC2-206ENST00000557566 DOCK10Q96BY6 2186 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 A0A0U1RQS6 177 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 OR5K4A6NMS3 321 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 A8MX80 341 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 C19orf84I3L1E1 186 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 FOXN3O00409 490 aaPredicted RBP6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 TM9SF1O15321 606 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 PSTPIP1O43586 416 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 SPOPO43791 374 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 SCRG1O75711 98 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 RNF8O76064 485 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 TJP3O95049 919 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 HTR3BO95264 441 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 ACSL3O95573 720 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 KRT5P13647 590 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 F3P13726 295 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 TYRP1P17643 537 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 AGAP20933 346 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 CA5AP35218 305 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 CETN2P41208 172 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 CAPZBP47756 277 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 ITGA8P53708 1063 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 KCNK10P57789 538 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 XIAPP98170 497 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 CDR2Q01850 454 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 SLC6A3Q01959 620 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 GCNT1Q02742 428 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 Q0VFX4 171 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 ZNF169Q14929 603 aaPredicted RBP6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 TBCCQ15814 346 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 THEMIS2Q5TEJ8 643 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 FAM69BQ5VUD6 431 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 RWDD4Q6NW29 188 aaKnown RBP6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 GJB7Q6PEY0 223 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 MARK2Q7KZI7 788 aaKnown RBP6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 ZNF677Q86XU0 584 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 TMEM126BQ8IUX1 230 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 BCORP1Q8N888 145 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 ANKRD42Q8N9B4 389 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 C2CD4AQ8NCU7 369 aaPredicted RBP6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 MGARPQ8TDB4 240 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 ZNF606Q8WXB4 792 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 SHC3Q92529 594 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 KAT5Q92993 513 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 NT5C3BQ969T7 300 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 ZDHHC12Q96GR4 267 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 FAM46AQ96IP4 442 aaKnown RBP6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 SMC6Q96SB8 1091 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 TBCBQ99426 244 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 FOXC2Q99958 501 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 SYNCQ9H7C4 482 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 UCK1Q9HA47 277 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 TMEM248Q9NWD8 314 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 NMRK1Q9NWW6 199 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 LHX3Q9UBR4 397 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 TBC1D29Q9UFV1 150 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 ASIC3Q9UHC3 531 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 ZFP69BQ9UJL9 534 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 TMCO1Q9UM00 188 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 MTO1Q9Y2Z2 717 aaKnown RBP6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 COMMD3-BMI1R4GMX3 469 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 MXRA5Q9NR99 2828 aa6.61□□□□□ -1.35
SPTLC2-206ENST00000557566 NUP210LQ5VU65 1888 aa6.6□□□□□ -1.35
SPTLC2-206ENST00000557566 KIAA1324LA8MWY0 1029 aaPredicted RBP6.6□□□□□ -1.35
SPTLC2-206ENST00000557566 GSC2O15499 205 aa6.6□□□□□ -1.35
SPTLC2-206ENST00000557566 CREB3O43889 395 aa6.6□□□□□ -1.35
SPTLC2-206ENST00000557566 TYROBPO43914 113 aa6.6□□□□□ -1.35
SPTLC2-206ENST00000557566 PSMG1O95456 288 aa6.6□□□□□ -1.35
SPTLC2-206ENST00000557566 CLDN14O95500 239 aa6.6□□□□□ -1.35
SPTLC2-206ENST00000557566 SPTBP11277 2137 aa6.6□□□□□ -1.35
SPTLC2-206ENST00000557566 FOLR1P15328 257 aa6.6□□□□□ -1.35
SPTLC2-206ENST00000557566 CREB1P16220 341 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms