RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 LARSQ9P2J5 1176 aaKnown RBP3.47□□□□□ -1.85
VRK1-207ENST00000557352 ZHX1Q9UKY1 873 aaPredicted RBP3.47□□□□□ -1.85
VRK1-207ENST00000557352 KNSTRNQ9Y448 316 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 ABCC6O95255 1503 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 A0A1W2PP64 1363 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 NHSL1Q5SYE7 1610 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 ABCA3Q99758 1704 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 MED1Q15648 1581 aaPredicted RBP3.46□□□□□ -1.85
VRK1-207ENST00000557352 CAMTA1Q9Y6Y1 1673 aa3.46□□□□□ -1.85
VRK1-207ENST00000557352 PPIP5K1Q6PFW1 1433 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 SSH2Q76I76 1423 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 RGPD5Q99666 1765 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 A0A1W2PPR1 153 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 C15orf61A6NNL5 157 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 MAGEC1O60732 1142 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 CENPBP07199 599 aaPredicted RBP3.46□□□□□ -1.86
VRK1-207ENST00000557352 RBMS1P29558 406 aaKnown RBP3.46□□□□□ -1.86
VRK1-207ENST00000557352 TM4SF1P30408 202 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 MAN1A1P33908 653 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 PGFP49763 221 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 SETQ01105 290 aaPredicted RBP3.46□□□□□ -1.86
VRK1-207ENST00000557352 KRT32Q14532 448 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 ITPRIPL2Q3MIP1 535 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 PHLDA2Q53GA4 152 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 C20orf194Q5TEA3 1177 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 CCDC70Q6NSX1 233 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 RSRC2Q7L4I2 434 aaKnown RBP3.46□□□□□ -1.86
VRK1-207ENST00000557352 PAPD5Q8NDF8 572 aaKnown RBP3.46□□□□□ -1.86
VRK1-207ENST00000557352 SMAP2Q8WU79 429 aaPredicted RBP3.46□□□□□ -1.86
VRK1-207ENST00000557352 LMF2Q9BU23 707 aaKnown RBP3.46□□□□□ -1.86
VRK1-207ENST00000557352 RAB11FIP5Q9BXF6 653 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 TRIM6Q9C030 488 aaPredicted RBP3.46□□□□□ -1.86
VRK1-207ENST00000557352 CPVLQ9H3G5 476 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 HRH4Q9H3N8 390 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 SPHK2Q9NRA0 654 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 OLA1Q9NTK5 396 aaKnown RBP3.46□□□□□ -1.86
VRK1-207ENST00000557352 TERF2IPQ9NYB0 399 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 CACNG4Q9UBN1 327 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 TUBE1Q9UJT0 475 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 PLEKHH1Q9ULM0 1364 aa3.46□□□□□ -1.86
VRK1-207ENST00000557352 CDK12Q9NYV4 1490 aaPredicted RBP3.46□□□□□ -1.86
VRK1-207ENST00000557352 OVOS2A0A0J9YW53 1432 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 USP6P35125 1406 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 OVOS2Q6IE36 1432 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 PEAK1Q9H792 1746 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 ANKRD61A6NGH8 418 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 XRCC3O43542 346 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 IDH3BO43837 385 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 WDPCPO95876 746 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 SCGB1D1O95968 90 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 DNAH10OSP0CZ25 163 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 ACADMP11310 421 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 MAPK4P31152 587 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 CALCOCO2Q13137 446 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 SQLEQ14534 574 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 FASTKD3Q14CZ7 662 aaKnown RBP3.45□□□□□ -1.86
VRK1-207ENST00000557352 XKR3Q5GH77 459 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 SLC25A53Q5H9E4 307 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 JAKMIP3Q5VZ66 844 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 FIGLAQ6QHK4 219 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 BTN2A1Q7KYR7 527 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 CEP57L1Q8IYX8 460 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 VANGL1Q8TAA9 524 aaPredicted RBP3.45□□□□□ -1.86
VRK1-207ENST00000557352 RASL10AQ92737 203 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 FNDC11Q9BVV2 318 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 KCNK15Q9H427 330 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 HACL1Q9UJ83 578 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 KIF24Q5T7B8 1368 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 PNPLA6Q8IY17 1366 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 COL18A1P39060 1754 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 ZNF318Q5VUA4 2279 aa3.45□□□□□ -1.86
VRK1-207ENST00000557352 ZBED9Q6R2W3 1325 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 TTC21AQ8NDW8 1320 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 SLIT3O75094 1523 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 KAT6BQ8WYB5 2073 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 RGPD2P0DJD1 1756 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 IQSEC2Q5JU85 1478 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 PLEKHG2Q9H7P9 1386 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 LNP1A1A4G5 178 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 LRRC72A6NJI9 287 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 MPTX1A8MV57 137 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 J3KRW8 73 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 C22orf31O95567 290 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 CD4P01730 458 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 GARSP41250 739 aaKnown RBP3.44□□□□□ -1.86
VRK1-207ENST00000557352 TPD52P55327 224 aaPredicted RBP3.44□□□□□ -1.86
VRK1-207ENST00000557352 CXCL9Q07325 125 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 NR1D2Q14995 579 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 SLC25A47Q6Q0C1 308 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 CFAP206Q8IYR0 622 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 ADGRF2Q8IZF7 708 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 EID3Q8N140 333 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 ARHGAP24Q8N264 748 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.44□□□□□ -1.86
VRK1-207ENST00000557352 Q8NBF4 154 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 PRICKLE1Q96MT3 831 aaPredicted RBP3.44□□□□□ -1.86
VRK1-207ENST00000557352 FTOQ9C0B1 505 aaKnown RBP eCLIP3.44□□□□□ -1.86
VRK1-207ENST00000557352 MAN2C1Q9NTJ4 1040 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 SEPT11Q9NVA2 429 aaKnown RBP3.44□□□□□ -1.86
VRK1-207ENST00000557352 P4HTMQ9NXG6 502 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms