RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 GPS2Q13227 327 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 TMEM207Q6UWW9 146 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 SPNS2Q8IVW8 549 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 LRRC56Q8IYG6 542 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-209ENST00000557342 DSELQ8IZU8 1212 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 MR1Q95460 341 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 RNF31Q96EP0 1072 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 UBL7Q96S82 380 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-209ENST00000557342 CYTH2Q99418 400 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 C17orf62Q9BQA9 187 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 DPH7Q9BTV6 452 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 NDC1Q9BTX1 674 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 GPR87Q9BY21 358 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 ARL15Q9NXU5 204 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 NINJ2Q9NZG7 142 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 SNX7Q9UNH6 387 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 PCDHGA6Q9Y5G7 932 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 PKD1L2Q7Z442 2459 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 OR2A25A4D2G3 310 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 H3BMH7 237 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 ERVH48-1M5A8F1 160 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 HCRTR1O43613 425 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 WT1P19544 449 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-209ENST00000557342 ECHS1P30084 290 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 RORAP35398 523 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 PGGT1BP53609 377 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 ARSFP54793 590 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 TBPL1P62380 186 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 RPS15P62841 145 aaKnown RBP11.98□□□□□ -0.49
SLIRP-209ENST00000557342 RELAQ04206 551 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 DNASE1L3Q13609 305 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 ZNF460Q14592 562 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 GRM7Q14831 915 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 SLMAPQ14BN4 828 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 PHKG1Q16816 387 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 CRTC2Q53ET0 693 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-209ENST00000557342 PRAMEF17Q5VTA0 474 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 YOD1Q5VVQ6 348 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-209ENST00000557342 PRAMEF13Q5VWM6 474 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 CAPN13Q6MZZ7 669 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-209ENST00000557342 RHBDD2Q6NTF9 364 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 AGTRAPQ6RW13 159 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 ZNF517Q6ZMY9 492 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-209ENST00000557342 RNF44Q7L0R7 432 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 ADAMTSL2Q86TH1 951 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 CEP97Q8IW35 865 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 ZNF655Q8N720 491 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-209ENST00000557342 TTC29Q8NA56 475 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-209ENST00000557342 SLC38A9Q8NBW4 561 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 PROKR1Q8TCW9 393 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 CT55Q8WUE5 264 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 FBXL8Q96CD0 374 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 MED8Q96G25 268 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 CATSPER2Q96P56 530 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 ZFYVE21Q9BQ24 234 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 SELENOSQ9BQE4 189 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 PLCD4Q9BRC7 762 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 FUT8Q9BYC5 575 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 DERL2Q9GZP9 239 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 SPRTNQ9H040 489 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-209ENST00000557342 CDC42EP4Q9H3Q1 356 aaKnown RBP11.98□□□□□ -0.49
SLIRP-209ENST00000557342 L2HGDHQ9H9P8 463 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 SLC6A20Q9NP91 592 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 ENAMQ9NRM1 1142 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 TXLNGQ9NUQ3 528 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 ABCF3Q9NUQ8 709 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 PCMTD2Q9NV79 361 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 CTNNAL1Q9UBT7 734 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 FER1L5A0AVI2 2057 aa11.98□□□□□ -0.49
SLIRP-209ENST00000557342 A0A0J9YVX5 310 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 TERTO14746 1132 aaKnown RBP11.97□□□□□ -0.49
SLIRP-209ENST00000557342 CTSVO60911 334 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 KATNA1O75449 491 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 WISP3O95389 354 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-209ENST00000557342 RECKO95980 971 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 ITGB2P05107 769 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 CD63P08962 238 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 RAB40ALP0C0E4 278 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 RHOXF2BP0C7M4 288 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 EZRP15311 586 aaKnown RBP11.97□□□□□ -0.49
SLIRP-209ENST00000557342 RAB10P61026 200 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 CDKL1Q00532 357 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 NAE1Q13564 534 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 ZKSCAN8Q15776 578 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-209ENST00000557342 FAM214AQ32MH5 1076 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 ZNF425Q6IV72 752 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 LCTLQ6UWM7 567 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 SBSNQ6UWP8 590 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 RAPH1Q70E73 1250 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 FRA10AC1Q70Z53 315 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 CCDC91Q7Z6B0 441 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 PAQR7Q86WK9 346 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 STARD8Q92502 1023 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 WBP1Q96G27 269 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 ZNF285Q96NJ3 590 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 RHOXF2Q9BQY4 288 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 HAUS8Q9BT25 410 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 ATG10Q9H0Y0 220 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 CHST8Q9H2A9 424 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 ACSS3Q9H6R3 686 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms