RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 VKORC1Q9BQB6 163 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 BPIFA3Q9BQP9 254 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 TRIM51Q9BSJ1 452 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 NPDC1Q9NQX5 325 aaPredicted RBP11.91□□□□□ -0.5
PSEN1-221ENST00000557293 DLL4Q9NR61 685 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.91□□□□□ -0.5
PSEN1-221ENST00000557293 ASB1Q9Y576 335 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 hCG_1818297A0A087WSY0 165 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 A0A0J9YVX5 310 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 HACD1B0YJ81 288 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 NPIPA5E9PKD4 350 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 FAM227AF5H4B4 570 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 GPC4O75487 556 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 FAM155BO75949 473 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 FBLP22087 321 aaKnown RBP11.9□□□□□ -0.5
PSEN1-221ENST00000557293 CXCR2P25025 360 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 PSMB5P28074 263 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 CCR7P32248 378 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 CD96P40200 585 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 HCFC1P51610 2035 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 SNRPNP63162 240 aaKnown RBP11.9□□□□□ -0.5
PSEN1-221ENST00000557293 HSF1Q00613 529 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 ALDH6A1Q02252 535 aaKnown RBP11.9□□□□□ -0.5
PSEN1-221ENST00000557293 PLOD1Q02809 727 aaPredicted RBP11.9□□□□□ -0.5
PSEN1-221ENST00000557293 ZNF33BQ06732 778 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 TFF3Q07654 80 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 TUBA3CQ13748 450 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 ITIH4Q14624 930 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 DNAJC21Q5F1R6 531 aaKnown RBP11.9□□□□□ -0.5
PSEN1-221ENST00000557293 RNFT1Q5M7Z0 435 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 ANKRD20A2Q5SQ80 823 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 ANKRD20A1Q5TYW2 823 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 ANKRD20A3Q5VUR7 823 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 TUBA3EQ6PEY2 450 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 PACS1Q6VY07 963 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 NEK10Q6ZWH5 1172 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 SLC22A15Q8IZD6 547 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 ARHGEF39Q8N4T4 335 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 DNAAF3Q8N9W5 541 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 SCMH1Q96GD3 660 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 FRMD6Q96NE9 622 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 TGIF2Q9GZN2 237 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 INTS7Q9NVH2 962 aaKnown RBP11.9□□□□□ -0.5
PSEN1-221ENST00000557293 IMPACTQ9P2X3 320 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 NPIPA1Q9UND3 350 aa11.9□□□□□ -0.5
PSEN1-221ENST00000557293 ZNF469Q96JG9 3925 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-221ENST00000557293 A0A1W2PPV9 198 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 OR51F1A6NGY5 319 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 RASGRF2O14827 1237 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 TTI1O43156 1089 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 FOXS1O43638 330 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 OR1I1O60431 355 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 MAN1A2O60476 641 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 FTH1P02794 183 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 GYPCP04921 128 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 MYBL2P10244 700 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 ICAM2P13598 275 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 TPH1P17752 444 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 KLK2P20151 261 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 COMTP21964 271 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 FOXN2P32314 431 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 SLC26A3P40879 764 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 CSE1LP55060 971 aaKnown RBP11.89□□□□□ -0.51
PSEN1-221ENST00000557293 DSG2Q14126 1118 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 IQCB1Q15051 598 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 MUM1Q2TAK8 710 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 FCRLBQ6BAA4 426 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 RNF44Q7L0R7 432 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 BEST3Q8N1M1 668 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 MARVELD2Q8N4S9 558 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 OR2A1Q8NGT9 310 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 LKAAEAR1Q8TD35 194 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 FOXC2Q99958 501 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 TBL1YQ9BQ87 522 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 KLHL1Q9NR64 748 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 TRPC4Q9UBN4 977 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 RPH3AQ9Y2J0 694 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-221ENST00000557293 AAR2Q9Y312 384 aaKnown RBP11.89□□□□□ -0.51
PSEN1-221ENST00000557293 LUC7L2Q9Y383 392 aaKnown RBP11.89□□□□□ -0.51
PSEN1-221ENST00000557293 SCN2AQ99250 2005 aa11.89□□□□□ -0.51
PSEN1-221ENST00000557293 IGHV3-20A0A0C4DH32 117 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 OR2A25A4D2G3 310 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 KRT87PA6NCN2 255 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 SMTNL1A8MU46 457 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 A8MUI8 341 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 QSOX1O00391 747 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 KDM1AO60341 852 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 TOXO94900 526 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 SLCO2B1O94956 709 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 FKBP9O95302 570 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 EIF2S1P05198 315 aaKnown RBP11.88□□□□□ -0.51
PSEN1-221ENST00000557293 HEXBP07686 556 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 EMP3P54852 163 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 SYT16Q17RD7 645 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 CCSMST1Q4G0I0 132 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 ACER2Q5QJU3 275 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 KCTD11Q693B1 232 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 ITPRIPL1Q6GPH6 555 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 SPINK14Q6IE38 97 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 BBS12Q6ZW61 710 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms