RNA–Protein interactions for RNA: ENST00000556853.5

CNOT10-219, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 4

Gene CNOT10, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-219ENST00000556853 ATG10Q9H0Y0 220 aa11.47□□□□□ -0.57
CNOT10-219ENST00000556853 OR6C2Q9NZP2 312 aa11.47□□□□□ -0.57
CNOT10-219ENST00000556853 ABCA1O95477 2261 aa11.47□□□□□ -0.57
CNOT10-219ENST00000556853 IGHV3-20A0A0C4DH32 117 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 FIGNL2A6NMB9 653 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 CDK2AP1O14519 115 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 GAPDHSO14556 408 aaPredicted RBP11.46□□□□□ -0.57
CNOT10-219ENST00000556853 FFAR3O14843 346 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 GPR42O15529 346 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 FGFR1OPO95684 399 aaKnown RBP11.46□□□□□ -0.57
CNOT10-219ENST00000556853 PSMA2P25787 234 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 PDHA2P29803 388 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 HMGCLP35914 325 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 GRIA3P42263 894 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 ASCL1P50553 236 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 ITGA9Q13797 1035 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 CAPRIN1Q14444 709 aaKnown RBP11.46□□□□□ -0.57
CNOT10-219ENST00000556853 KIR2DS3Q14952 304 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 DPYSL2Q16555 572 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 CLEC16AQ2KHT3 1053 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 PDLIM3Q53GG5 364 aaPredicted RBP11.46□□□□□ -0.57
CNOT10-219ENST00000556853 FIGNQ5HY92 759 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 KLHDC7AQ5VTJ3 777 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 ZNF585AQ6P3V2 769 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 FAM151BQ6UXP7 276 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 NT5DC3Q86UY8 548 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 PPP1R14CQ8TAE6 165 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 TFGQ92734 400 aaPredicted RBP11.46□□□□□ -0.57
CNOT10-219ENST00000556853 SELENOSQ9BQE4 189 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 PLCD4Q9BRC7 762 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 STK33Q9BYT3 514 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 TGIF2Q9GZN2 237 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 SMOXQ9NWM0 555 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.46□□□□□ -0.571e-6■■□□□ 12
CNOT10-219ENST00000556853 TRPC4Q9UBN4 977 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 FOXD3Q9UJU5 478 aaPredicted RBP11.46□□□□□ -0.57
CNOT10-219ENST00000556853 MAN1B1Q9UKM7 699 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 ZNF281Q9Y2X9 895 aa11.46□□□□□ -0.57
CNOT10-219ENST00000556853 SVEP1Q4LDE5 3571 aa11.46□□□□□ -0.58
CNOT10-219ENST00000556853 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.46□□□□□ -0.588e-11■■■■■ 40.5
CNOT10-219ENST00000556853 A0A087X1B8 175 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 STATHP02808 62 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 C8orf89P0DMQ9 161 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 CCNCP24863 283 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 GALNT2Q10471 571 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 AP1B1Q10567 949 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 ZNF658BQ4V348 819 aaPredicted RBP11.45□□□□□ -0.58
CNOT10-219ENST00000556853 WASHC2DQ5SRD0 308 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 RIPPLY2Q5TAB7 128 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 ZDHHC20Q5W0Z9 365 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 PAOXQ6QHF9 649 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 SULF2Q8IWU5 870 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 SRPK1Q96SB4 655 aaKnown RBP11.45□□□□□ -0.58
CNOT10-219ENST00000556853 YIPF2Q9BWQ6 316 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 GSX2Q9BZM3 304 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 DEFB127Q9H1M4 99 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 TRIM45Q9H8W5 580 aaPredicted RBP11.45□□□□□ -0.58
CNOT10-219ENST00000556853 COG4Q9H9E3 785 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 YAE1D1Q9NRH1 226 aa11.45□□□□□ -0.58
CNOT10-219ENST00000556853 STOX2Q9P2F5 926 aaPredicted RBP11.45□□□□□ -0.58
CNOT10-219ENST00000556853 KLF13Q9Y2Y9 288 aaPredicted RBP11.45□□□□□ -0.58
CNOT10-219ENST00000556853 GLYATL1P3A0A0U1RQE8 302 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 FAM47E-STBD1D6RA91 191 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 KLRC4-KLRK1H3BQV0 150 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 BCKDKO14874 412 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 CD5LO43866 347 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 SRPX2O60687 465 aaPredicted RBP11.44□□□□□ -0.58
CNOT10-219ENST00000556853 RNF8O76064 485 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 GFPT2O94808 682 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 SOX30O94993 753 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 UCHL3P15374 230 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 PRLHRP49683 370 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 VSX2P58304 361 aaPredicted RBP11.44□□□□□ -0.58
CNOT10-219ENST00000556853 CPEB2Q7Z5Q1 589 aaKnown RBP11.44□□□□□ -0.58
CNOT10-219ENST00000556853 SLC5A8Q8N695 610 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 ZFP62Q8NB50 900 aaPredicted RBP11.44□□□□□ -0.58
CNOT10-219ENST00000556853 OR5AR1Q8NGP9 310 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 M1APQ8TC57 530 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 TSGA13Q96PP4 275 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 ZFYVE21Q9BQ24 234 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 LRTM1Q9HBL6 345 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 NPFFR2Q9Y5X5 522 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 USF3Q68DE3 2245 aa11.44□□□□□ -0.58
CNOT10-219ENST00000556853 OR14I1A6ND48 311 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 SERINC4A6NH21 518 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 MFSD11O43934 449 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 TP53P04637 393 aaPredicted RBP11.43□□□□□ -0.58
CNOT10-219ENST00000556853 ATP1A3P13637 1013 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 PRKCIP41743 596 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 CYB561P49447 251 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 TNK1Q13470 666 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 IFI16Q16666 785 aaKnown RBP11.43□□□□□ -0.58
CNOT10-219ENST00000556853 MUM1Q2TAK8 710 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 HIST2H2BDQ6DRA6 164 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 FIGLAQ6QHK4 219 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 LANCL3Q6ZV70 420 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 KIF18BQ86Y91 864 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 FMR1NBQ8N0W7 255 aaPredicted RBP11.43□□□□□ -0.58
CNOT10-219ENST00000556853 AMER3Q8N944 861 aa11.43□□□□□ -0.58
CNOT10-219ENST00000556853 MAPK1IP1LQ8NDC0 245 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms