RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 C10orf90Q96M02 699 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 CCDC3Q9BQI4 270 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 SLC2A11Q9BYW1 496 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 MAN2C1Q9NTJ4 1040 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 ZDHHC18Q9NUE0 388 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 OR6C2Q9NZP2 312 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 EXOGQ9Y2C4 368 aaKnown RBP3.96□□□□□ -1.78
SCFD1-221ENST00000556534 CASTOR2A6NHX0 329 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 KRTAP16-1A8MUX0 517 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 FPGTO14772 594 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 TBX10O75333 385 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 SEC24AO95486 1093 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 GGPS1O95749 300 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 FBXL22Q6P050 247 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 SLC25A47Q6Q0C1 308 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 FIP1L1Q6UN15 594 aaKnown RBP3.95□□□□□ -1.78
SCFD1-221ENST00000556534 G2E3Q7L622 706 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 TLK2Q86UE8 772 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 LGI2Q8N0V4 545 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 KLHDC1Q8N7A1 406 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 ZNF614Q8N883 585 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 CCDC191Q8NCU4 936 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 MAPK1IP1LQ8NDC0 245 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 OR10G8Q8NGN5 311 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 SMAP2Q8WU79 429 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-221ENST00000556534 GATAD1Q8WUU5 269 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 SNRNP27Q8WVK2 155 aaKnown RBP3.95□□□□□ -1.78
SCFD1-221ENST00000556534 TAF15Q92804 592 aaKnown RBP eCLIP3.95□□□□□ -1.78
SCFD1-221ENST00000556534 C4orf45Q96LM5 186 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 PANK2Q9BZ23 570 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 ST6GALNAC4Q9H4F1 302 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 RABEP2Q9H5N1 569 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 DNAJC4Q9NNZ3 241 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 CHST11Q9NPF2 352 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 ASIC3Q9UHC3 531 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 ANGPTL3Q9Y5C1 460 aa3.95□□□□□ -1.78
SCFD1-221ENST00000556534 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 DIAPH2O60879 1101 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 ATP6AP2O75787 350 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 VTNP04004 478 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 EEF1B2P24534 225 aaKnown RBP3.94□□□□□ -1.78
SCFD1-221ENST00000556534 RAD23AP54725 363 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 UBASH3AP57075 661 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 SGSM1Q2NKQ1 1148 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 TCP11X2Q5H9J9 407 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 OR4A47Q6IF82 309 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 Q6ZRP5 223 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 HOGA1Q86XE5 327 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 RASGEF1AQ8N9B8 481 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-221ENST00000556534 ZNF485Q8NCK3 441 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 GPRC5AQ8NFJ5 357 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 RMDN1Q96DB5 314 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 LINC00479Q96M42 142 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 MAP3K3Q99759 626 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 CLEC7AQ9BXN2 247 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 EGLN1Q9GZT9 426 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 ZMYND12Q9H0C1 365 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 PPANQ9NQ55 473 aaKnown RBP3.94□□□□□ -1.78
SCFD1-221ENST00000556534 ERAP1Q9NZ08 941 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 MAN1B1Q9UKM7 699 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 CCL27Q9Y4X3 112 aa3.94□□□□□ -1.78
SCFD1-221ENST00000556534 TRBV5-5A0A0J9YX44 114 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 C15orf61A6NNL5 157 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 C2CD4DB7Z1M9 353 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 BAG3O95817 575 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 SLC2A2P11168 524 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-221ENST00000556534 OPRL1P41146 370 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 LBX1P52954 281 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 PAX9P55771 341 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 GSDMDP57764 484 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 GUCY2DQ02846 1103 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 COG2Q14746 738 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 EXT1Q16394 746 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 LCN1P1Q5VSP4 162 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 PTAR1Q7Z6K3 402 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-221ENST00000556534 NDUFAF2Q8N183 169 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 ANKRD13CQ8N6S4 541 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 APOBEC4Q8WW27 367 aaKnown RBP3.93□□□□□ -1.78
SCFD1-221ENST00000556534 ZNRF4Q8WWF5 429 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 VPS33AQ96AX1 596 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 ZNF689Q96CS4 500 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-221ENST00000556534 MOCOSQ96EN8 888 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 SPATA33Q96N06 139 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 ZNF558Q96NG5 402 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 MCRIP2Q9BUT9 160 aaKnown RBP3.93□□□□□ -1.78
SCFD1-221ENST00000556534 SLC25A23Q9BV35 468 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 PRRG4Q9BZD6 226 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 MTMR12Q9C0I1 747 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 FZD8Q9H461 694 aa3.93□□□□□ -1.78
SCFD1-221ENST00000556534 NFKBIL1Q9UBC1 381 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-221ENST00000556534 A0A1W2PR80 420 aa3.92□□□□□ -1.78
SCFD1-221ENST00000556534 CCL24O00175 119 aa3.92□□□□□ -1.78
SCFD1-221ENST00000556534 EPHB6O15197 1021 aa3.92□□□□□ -1.78
SCFD1-221ENST00000556534 MOCS3O95396 460 aa3.92□□□□□ -1.78
SCFD1-221ENST00000556534 DUS4LO95620 317 aaKnown RBP3.92□□□□□ -1.78
SCFD1-221ENST00000556534 GSRP00390 522 aa3.92□□□□□ -1.78
SCFD1-221ENST00000556534 DPEP1P16444 411 aa3.92□□□□□ -1.78
SCFD1-221ENST00000556534 CYP2A7P20853 494 aa3.92□□□□□ -1.78
SCFD1-221ENST00000556534 LHCGRP22888 699 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms