RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 OR4N4Q8N0Y3 316 aa13.24□□□□□ -0.29
ACTN1-219ENST00000556432 EID3Q8N140 333 aa13.24□□□□□ -0.29
ACTN1-219ENST00000556432 OR2L8Q8NGY9 312 aa13.24□□□□□ -0.29
ACTN1-219ENST00000556432 BPIFA3Q9BQP9 254 aa13.24□□□□□ -0.29
ACTN1-219ENST00000556432 ZNF700Q9H0M5 742 aa13.24□□□□□ -0.29
ACTN1-219ENST00000556432 CDC14AQ9UNH5 594 aa13.24□□□□□ -0.29
ACTN1-219ENST00000556432 CPAMD8Q8IZJ3 1885 aa13.24□□□□□ -0.29
ACTN1-219ENST00000556432 ACANP16112 2415 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 FBN3Q75N90 2809 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 F8W8V4 182 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 ZNHIT1O43257 154 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 TSPAN12O95859 305 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 COMTP21964 271 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 PSMB5P28074 263 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 EEF1DP29692 281 aaKnown RBP13.23□□□□□ -0.29
ACTN1-219ENST00000556432 SLC1A1P43005 524 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 PPP2R2AP63151 447 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 DSG2Q14126 1118 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 ITIH4Q14624 930 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 PCOLCEQ15113 449 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 FCRLBQ6BAA4 426 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 BEST3Q8N1M1 668 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 TAB3Q8N5C8 712 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-219ENST00000556432 AMER2Q8N7J2 671 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 CHDHQ8NE62 594 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-219ENST00000556432 ZUFSPQ96AP4 578 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 MIPEPQ99797 713 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 C19orf43Q9BQ61 176 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 TMUB1Q9BVT8 246 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 RAB11FIP5Q9BXF6 653 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 NLE1Q9NVX2 485 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-219ENST00000556432 ANKRD10Q9NXR5 420 aa13.23□□□□□ -0.29
ACTN1-219ENST00000556432 IGLV3-12A0A075B6K2 115 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 hCG_1818297A0A087WSY0 165 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 A0A1W2PQ72 361 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 TARM1B6A8C7 271 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 E9PLN8 166 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 H7C0S8 307 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 PRRG2O14669 202 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 AKR1B10O60218 316 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 SEC24DO94855 1032 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-219ENST00000556432 FKBP9O95302 570 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 TPH1P17752 444 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 ST13P50502 369 aaKnown RBP13.22□□□□□ -0.29
ACTN1-219ENST00000556432 HSF1Q00613 529 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 MSLNQ13421 630 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-219ENST00000556432 TAZQ16635 292 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 BTBD16Q32M84 506 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 ANKRD20A2Q5SQ80 823 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 ANKRD20A1Q5TYW2 823 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 ANKRD20A3Q5VUR7 823 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 DENND5AQ6IQ26 1287 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 TTC23LQ6PF05 361 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 PACS1Q6VY07 963 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 RHOT2Q8IXI1 618 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 SLC22A15Q8IZD6 547 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 GHDCQ8N2G8 530 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 RAB42Q8N4Z0 105 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 DNAAF3Q8N9W5 541 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 PHF10Q8WUB8 498 aaKnown RBP13.22□□□□□ -0.29
ACTN1-219ENST00000556432 METTL21AQ8WXB1 218 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 IQCDQ96DY2 449 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 MMABQ96EY8 250 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-219ENST00000556432 CDKN2AIPNLQ96HQ2 116 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 C10orf90Q96M02 699 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 VKORC1Q9BQB6 163 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 ZNF559Q9BR84 538 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 UTP23Q9BRU9 249 aaKnown RBP13.22□□□□□ -0.29
ACTN1-219ENST00000556432 TMEM121Q9BTD3 319 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 TUBB6Q9BUF5 446 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 MENTQ9BUN1 341 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 HEMGNQ9BXL5 484 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 HES7Q9BYE0 225 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 MKKSQ9NPJ1 570 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-219ENST00000556432 FEZ2Q9UHY8 353 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-219ENST00000556432 MKL2Q9ULH7 1088 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.22□□□□□ -0.29
ACTN1-219ENST00000556432 ABCA4P78363 2273 aa13.22□□□□□ -0.29
ACTN1-219ENST00000556432 OR51F1A6NGY5 319 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 FOXO6A8MYZ6 492 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 PSTPIP1O43586 416 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 ASNA1O43681 348 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 NRP2O60462 931 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 GYPCP04921 128 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 C8orf89P0DMQ9 161 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 CD46P15529 392 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 MSNP26038 577 aaKnown RBP13.21□□□□□ -0.29
ACTN1-219ENST00000556432 CTNNA2P26232 953 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 OC90Q02509 493 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-219ENST00000556432 TUBA3CQ13748 450 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 POU6F1Q14863 301 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 OR1C1Q15619 314 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 ACER2Q5QJU3 275 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 MFSD4BQ5TF39 518 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 TUBA3EQ6PEY2 450 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 VRK3Q8IV63 474 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 TMEM178AQ8NBL3 297 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 ACBD4Q8NC06 268 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 FAM98AQ8NCA5 519 aaKnown RBP13.21□□□□□ -0.29
ACTN1-219ENST00000556432 GSDMBQ8TAX9 411 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms