RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 LRRC40Q9H9A6 602 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 LANCL2Q9NS86 450 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 TMEM140Q9NV12 185 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 HACD3Q9P035 362 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 PADI4Q9UM07 663 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 SUFUQ9UMX1 484 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 DRG1Q9Y295 367 aaKnown RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 DNAJC16Q9Y2G8 782 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 PPIL1Q9Y3C6 166 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 SPTBP11277 2137 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CFAP54Q96N23 3096 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 HEATR5BQ9P2D3 2071 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 GLYATL1P3A0A0U1RQE8 302 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 RGSL1A5PLK6 1076 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 OR2AG2A6NM03 316 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 RHPN2P1A8MT19 583 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 B5MCH6 92 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 PGRMC1O00264 195 aaKnown RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 GRID2O43424 1007 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 ZNF189O75820 626 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 CDK14O94921 469 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 EPOP01588 193 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 POLBP06746 335 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 ACP5P13686 325 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 ZNF8P17098 575 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 TRIM23P36406 574 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 COILP38432 576 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 SPAM1P38567 509 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 ACTR1BP42025 376 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 GRIA1P42261 906 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 KIAA1024LP59773 190 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 ACTR1AP61163 376 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 SARNPP82979 210 aaKnown RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 PDE1BQ01064 536 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 DPTQ07507 201 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 TMEM115Q12893 351 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 KRT33BQ14525 404 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 BRD3Q15059 726 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 TAF1AQ15573 450 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 SMAD1Q15797 465 aaKnown RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 ATP13A5Q4VNC0 1218 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 FNBP1LQ5T0N5 605 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 CERCAMQ5T4B2 595 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 KCTD16Q68DU8 428 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 TMEM220Q6QAJ8 160 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 RANBP10Q6VN20 620 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 SYT10Q6XYQ8 523 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 DOK3Q7L591 496 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 ZNF572Q7Z3I7 529 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 TRAPPC5Q8IUR0 188 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 MIER2Q8N344 545 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 FSTL5Q8N475 847 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 TRAM1L1Q8N609 369 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 GLIS1Q8NBF1 620 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 PPHLN1Q8NEY8 458 aaKnown RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 OR13C4Q8NGS5 318 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 OR4C6Q8NH72 309 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 IFI44Q8TCB0 444 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 BRSK1Q8TDC3 778 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 NAT14Q8WUY8 206 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 EID2BQ96D98 161 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 SGF29Q96ES7 293 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 PDXPQ96GD0 296 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 PDLIM2Q96JY6 352 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 WDR24Q96S15 920 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 ZSCAN5AQ9BUG6 496 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 LRRC61Q9BV99 259 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 SCNM1Q9BWG6 230 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 TEX101Q9BY14 249 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 GSDMCQ9BYG8 508 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 TRIM31Q9BZY9 425 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 TRABDQ9H4I3 376 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 FGF22Q9HCT0 170 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 KLC4Q9NSK0 619 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 SPATS2LQ9NUQ6 558 aaKnown RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 AURKAIP1Q9NWT8 199 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 NLGN3Q9NZ94 848 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 PAK5Q9P286 719 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 LRIT1Q9P2V4 623 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 ATXN10Q9UBB4 475 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 FEZ2Q9UHY8 353 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 CRLS1Q9UJA2 301 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 ANAPC5Q9UJX4 755 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 ANGPTL2Q9UKU9 493 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 PNMA8BQ9ULN7 279 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-238ENST00000556288 SNX12Q9UMY4 172 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 PSMD13Q9UNM6 376 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 CLCA2Q9UQC9 943 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 KCNK6Q9Y257 313 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 SAR1BQ9Y6B6 198 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 CSNK1G3Q9Y6M4 447 aa4.57□□□□□ -1.68
ATXN3-238ENST00000556288 DMXL1Q9Y485 3027 aa4.56□□□□□ -1.68
ATXN3-238ENST00000556288 MYO15AQ9UKN7 3530 aa4.56□□□□□ -1.68
ATXN3-238ENST00000556288 CCDC154A6NI56 674 aa4.56□□□□□ -1.68
ATXN3-238ENST00000556288 A8MU76 341 aa4.56□□□□□ -1.68
ATXN3-238ENST00000556288 PDZK1P1A8MUH7 402 aa4.56□□□□□ -1.68
ATXN3-238ENST00000556288 CXorf49A8MYA2 514 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-238ENST00000556288 LMO7DNF2Z398 122 aa4.56□□□□□ -1.68
ATXN3-238ENST00000556288 TPP1O14773 563 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms