RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PGM3O95394 542 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 NCBP2P52298 156 aaKnown RBP eCLIP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 PLEKHG4Q58EX7 1191 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 LIPJQ5W064 366 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 METTL2BQ6P1Q9 378 aaKnown RBP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 MSANTD1Q6ZTZ1 278 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 OTOP2Q7RTS6 562 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 CTU1Q7Z7A3 348 aaKnown RBP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 SLC35F5Q8WV83 523 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 KCTD7Q96MP8 289 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 CIB1Q99828 191 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 TNKS2Q9H2K2 1166 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 MVB12BQ9H7P6 319 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 CARS2Q9HA77 564 aaKnown RBP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 CXorf21Q9HAI6 301 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 APOBEC3GQ9HC16 384 aaKnown RBP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 TLR9Q9NR96 1032 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 ACTR3BQ9P1U1 418 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 MGAT4BQ9UQ53 548 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 PPM1BO75688 479 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 H6PDO95479 791 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 CD63P08962 238 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 GSTM2P28161 218 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 PCDH1Q08174 1060 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 SLBPQ14493 270 aaKnown RBP eCLIP10.46□□□□□ -0.73
ACTN1-216ENST00000556083 COLEC12Q5KU26 742 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 FBXL22Q6P050 247 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF433Q8N7K0 673 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-216ENST00000556083 OR10A6Q8NH74 314 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 SETD7Q8WTS6 366 aaKnown RBP10.46□□□□□ -0.73
ACTN1-216ENST00000556083 EMID1Q96A84 441 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-216ENST00000556083 NXPE2Q96DL1 559 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 CGREF1Q99674 301 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 TTYH1Q9H313 450 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF639Q9UID6 485 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 AP1M2Q9Y6Q5 423 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF541Q9H0D2 1346 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 KLRG2A4D1S0 409 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-216ENST00000556083 PRAMEF11O60813 436 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 AHSA1O95433 338 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 CHRNA1P02708 482 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 FADDQ13158 208 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 MRPL49Q13405 166 aaKnown RBP10.46□□□□□ -0.73
ACTN1-216ENST00000556083 ARL6IP1Q15041 203 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 ELOCQ15369 112 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 ITPRIPL2Q3MIP1 535 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF554Q86TJ5 538 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF548Q8NEK5 533 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-216ENST00000556083 OR10G2Q8NGC3 310 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 SPATA22Q8NHS9 363 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 BBS10Q8TAM1 723 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 GAL3ST4Q96RP7 486 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 RANBP9Q96S59 729 aa10.46□□□□□ -0.73
ACTN1-216ENST00000556083 CHMP1AQ9HD42 196 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-216ENST00000556083 PRSS51A0A1B0GVH4 220 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 FAM189A1O60320 539 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 BANF1O75531 89 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 SCGB2A1O75556 95 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 CYP11A1P05108 521 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 ECHS1P30084 290 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 MAP3K8P41279 467 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 HSPB3Q12988 150 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 SIM2Q14190 667 aaPredicted RBP10.46□□□□□ -0.74
ACTN1-216ENST00000556083 CRB2Q5IJ48 1285 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 SNAP47Q5SQN1 464 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 BAIAP2L2Q6UXY1 529 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 C3P1Q6ZMU1 363 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 ARMCX6Q7L4S7 300 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 CMTR2Q8IYT2 770 aaKnown RBP10.46□□□□□ -0.74
ACTN1-216ENST00000556083 C7orf61Q8IZ16 206 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 CHST4Q8NCG5 386 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 ZUFSPQ96AP4 578 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 RBP7Q96R05 134 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 NPY6RQ99463 290 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 G6PC3Q9BUM1 346 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 HERC2P3Q9BVR0 1158 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 CACNA1FO60840 1977 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 BHMG1C9JSJ3 638 aaPredicted RBP10.46□□□□□ -0.74
ACTN1-216ENST00000556083 CLIC1O00299 241 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 ADAMTS3O15072 1205 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 SLC6A6P31641 620 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 TLE2Q04725 743 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 PON3Q15166 354 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 TLR1Q15399 786 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 CDKL4Q5MAI5 379 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 SIDT2Q8NBJ9 832 aaKnown RBP10.46□□□□□ -0.74
ACTN1-216ENST00000556083 SGCDQ92629 289 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 TESCQ96BS2 214 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 ZDHHC12Q96GR4 267 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF570Q96NI8 536 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 SIX2Q9NPC8 291 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 GRHL1Q9NZI5 618 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 TMPRSS11EQ9UL52 423 aa10.46□□□□□ -0.74
ACTN1-216ENST00000556083 FAM221BA6H8Z2 402 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 CSTF2P33240 577 aaKnown RBP eCLIP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 BMP8BP34820 402 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 ACADVLP49748 655 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 PRKCZQ05513 592 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 CBX3Q13185 183 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 SLC36A3Q495N2 470 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms