RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 PRMT9Q6P2P2 845 aa18.85■□□□□ 0.61
PRKCH-219ENST00000555906 KIRREL2Q6UWL6 708 aa18.85■□□□□ 0.61
PRKCH-219ENST00000555906 CES3Q6UWW8 571 aa18.85■□□□□ 0.61
PRKCH-219ENST00000555906 ZFYVE21Q9BQ24 234 aa18.85■□□□□ 0.61
PRKCH-219ENST00000555906 LZTFL1Q9NQ48 299 aa18.85■□□□□ 0.61
PRKCH-219ENST00000555906 HOMER3Q9NSC5 361 aa18.85■□□□□ 0.61
PRKCH-219ENST00000555906 NOVA2Q9UNW9 492 aaKnown RBP18.85■□□□□ 0.61
PRKCH-219ENST00000555906 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.84■□□□□ 0.61
PRKCH-219ENST00000555906 A0A0J9YVX5 310 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 ARHGEF33A8MVX0 844 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 GOLGA8KD6RF30 607 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 GOLGA8TH3BQL2 631 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 MYO1CO00159 1063 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 MED26O95402 600 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 CCDC175P0C221 793 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 PAMP19021 973 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 CMPK1P30085 196 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 FMO4P31512 558 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 MAGEA6P43360 314 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 KCNJ1P48048 391 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 CARSP49589 748 aaKnown RBP18.84■□□□□ 0.61
PRKCH-219ENST00000555906 FASTKQ14296 549 aaKnown RBP18.84■□□□□ 0.61
PRKCH-219ENST00000555906 KCNJ11Q14654 390 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 AGAP7PQ5VUJ5 663 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 SHISA6Q6ZSJ9 500 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 DTWD1Q8N5C7 304 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 TRIM58Q8NG06 486 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 OR11G2Q8NGC1 345 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 C10orf90Q96M02 699 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 AGAP4Q96P64 663 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 CRB3Q9BUF7 120 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 ZNF304Q9HCX3 659 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 FAM114A2Q9NRY5 505 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 VPS9D1Q9Y2B5 631 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 COPG1Q9Y678 874 aaKnown RBP18.84■□□□□ 0.61
PRKCH-219ENST00000555906 MAU2Q9Y6X3 613 aa18.84■□□□□ 0.61
PRKCH-219ENST00000555906 TCRBV7S3A2A0A539 114 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 ANKUB1A6NFN9 424 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 PSIP1O75475 530 aaKnown RBP18.83■□□□□ 0.6
PRKCH-219ENST00000555906 ERVK-10P10266 1014 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 EMP3P54852 163 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 ARHGAP19Q14CB8 494 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 MUM1Q2TAK8 710 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 ANKRD20A4Q4UJ75 823 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 HIST2H2BCQ6DN03 193 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 CILP2Q8IUL8 1156 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 OR9A1PQ8NGU1 263 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 SMPDL3AQ92484 453 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 FAM136AQ96C01 138 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 LHPPQ9H008 270 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 INTS10Q9NVR2 710 aaKnown RBP18.83■□□□□ 0.6
PRKCH-219ENST00000555906 ZNF282Q9UDV7 671 aaPredicted RBP18.83■□□□□ 0.6
PRKCH-219ENST00000555906 TSR3Q9UJK0 312 aaKnown RBP18.83■□□□□ 0.6
PRKCH-219ENST00000555906 ERRFI1Q9UJM3 462 aaPredicted RBP18.83■□□□□ 0.6
PRKCH-219ENST00000555906 NTNG1Q9Y2I2 539 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 CRYL1Q9Y2S2 319 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 CSAG2Q9Y5P2 127 aa18.83■□□□□ 0.6
PRKCH-219ENST00000555906 CPAMD8Q8IZJ3 1885 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 IGLV3-12A0A075B6K2 115 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 LOC105369274A0A096LPK9 316 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 LOC102723532A0A0G2JNH3 316 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 WIPF3A6NGB9 483 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 E5RI56 91 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 VPS26AO75436 327 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 SARNPP82979 210 aaKnown RBP18.82■□□□□ 0.6
PRKCH-219ENST00000555906 OCA2Q04671 838 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 KLC1Q07866 573 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 ELOAQ14241 798 aaKnown RBP18.82■□□□□ 0.6
PRKCH-219ENST00000555906 HIF1AQ16665 826 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 PRTGQ2VWP7 1150 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 ACSBG2Q5FVE4 666 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 B3GNTL1Q67FW5 361 aaPredicted RBP18.82■□□□□ 0.6
PRKCH-219ENST00000555906 OR4N4Q8N0Y3 316 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 PRELID2Q8N945 189 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 STT3BQ8TCJ2 826 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 MVB12AQ96EY5 273 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 DPH7Q9BTV6 452 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 ACAT2Q9BWD1 397 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 EPS8L2Q9H6S3 715 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 AGPAT4Q9NRZ5 378 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 ZC3H7BQ9UGR2 993 aaKnown RBP18.82■□□□□ 0.6
PRKCH-219ENST00000555906 CENPEQ02224 2701 aa18.82■□□□□ 0.6
PRKCH-219ENST00000555906 MAP2K7O14733 419 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 PRPF4O43172 522 aaKnown RBP eCLIP18.81■□□□□ 0.6
PRKCH-219ENST00000555906 CEP104O60308 925 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 CCNDBP1O95273 360 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 HPP00738 406 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 LDLRP01130 860 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 CATP04040 527 aaKnown RBP18.81■□□□□ 0.6
PRKCH-219ENST00000555906 ZGLP1P0C6A0 271 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 PKMP14618 531 aaKnown RBP18.81■□□□□ 0.6
PRKCH-219ENST00000555906 ACPPP15309 386 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 CHRM3P20309 590 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 FBLP22087 321 aaKnown RBP18.81■□□□□ 0.6
PRKCH-219ENST00000555906 RPA3P35244 121 aaPredicted RBP18.81■□□□□ 0.6
PRKCH-219ENST00000555906 TSFMP43897 325 aaKnown RBP18.81■□□□□ 0.6
PRKCH-219ENST00000555906 GLRBP48167 497 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 YBX1P67809 324 aaKnown RBP18.81■□□□□ 0.6
PRKCH-219ENST00000555906 KLHL38Q2WGJ6 581 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 TTLL9Q3SXZ7 439 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms