RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	RIT1	Q92963	219 aa		4.24	□□□□□ -1.73
KTN1-223	ENST00000555573	PARK7	Q99497	189 aa	Known RBP	4.24	□□□□□ -1.73
KTN1-223	ENST00000555573	SHARPIN	Q9H0F6	387 aa		4.24	□□□□□ -1.73
KTN1-223	ENST00000555573	SIX2	Q9NPC8	291 aa		4.24	□□□□□ -1.73
KTN1-223	ENST00000555573	ADPRHL2	Q9NX46	363 aa		4.24	□□□□□ -1.73
KTN1-223	ENST00000555573	P4HTM	Q9NXG6	502 aa		4.24	□□□□□ -1.73
KTN1-223	ENST00000555573	SEPT10	Q9P0V9	454 aa		4.24	□□□□□ -1.73
KTN1-223	ENST00000555573	CDH7	Q9ULB5	785 aa		4.24	□□□□□ -1.73
KTN1-223	ENST00000555573	CCL24	O00175	119 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	ZNF197	O14709	1029 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	STX6	O43752	255 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	NGF	P01138	241 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	RLN1	P04808	185 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	SERPING1	P05155	500 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	DARS	P14868	501 aa	Known RBP	4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	CEACAM8	P31997	349 aa	Predicted RBP	4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	CSTF2	P33240	577 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	GPR17	Q13304	367 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	SQLE	Q14534	574 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	P2RY6	Q15077	328 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	TAF13	Q15543	124 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	TYSND1	Q2T9J0	566 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	ANKRD20A4	Q4UJ75	823 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	ANKRD20A8P	Q5CZ79	823 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	SLC25A53	Q5H9E4	307 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	ANKRD20A2	Q5SQ80	823 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	ANKRD20A1	Q5TYW2	823 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	ANKRD20A3	Q5VUR7	823 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	OR4A47	Q6IF82	309 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	MARK2	Q7KZI7	788 aa	Known RBP	4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	HOOK3	Q86VS8	718 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	NR2C2AP	Q86WQ0	139 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	CCDC170	Q8IYT3	715 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	KLHDC1	Q8N7A1	406 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	LRRC8C	Q8TDW0	803 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	PYCR2	Q96C36	320 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	NODAL	Q96S42	347 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	EPYC	Q99645	322 aa		4.23	□□□□□ -1.73
KTN1-223	ENST00000555573	IGSF1	Q8N6C5	1336 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	YDJC	A8MPS7	323 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	SLC30A4	O14863	429 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	CAVIN2	O95810	425 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	PLG	P00747	810 aa	Predicted RBP	4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	STAG3L1	P0CL83	205 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	CA6	P23280	308 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	SLC35D3	Q5M8T2	416 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	ZNF449	Q6P9G9	518 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	BTNL8	Q6UX41	500 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	GBP6	Q6ZN66	633 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	C18orf65	Q6ZTR6	163 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	NOA1	Q8NC60	698 aa	Known RBP	4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	P2RX5	Q93086	422 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	ZNF524	Q96C55	264 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	INPP4A	Q96PE3	977 aa	Predicted RBP	4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	SDF2L1	Q9HCN8	221 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	RAB9B	Q9NP90	201 aa		4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.22	□□□□□ -1.73
KTN1-223	ENST00000555573	IGHV4-61	A0A0C4DH41	118 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	OOEP	A6NGQ2	149 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	IFITM10	A6NMD0	228 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	SMIM1	B2RUZ4	78 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	FLRT2	O43155	660 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	BAG3	O95817	575 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	IGHV4-59	P01825	116 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	PRSS1	P07477	247 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	EPOR	P19235	508 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	ALDH1B1	P30837	517 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	CDX1	P47902	265 aa	Predicted RBP	4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	PHEX	P78562	749 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	C20orf194	Q5TEA3	1177 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	SLC35E4	Q6ICL7	350 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	FAM166A	Q6J272	317 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	ANKRD33	Q7Z3H0	272 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	PIGZ	Q86VD9	579 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	AMIGO1	Q86WK6	493 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	NUP93	Q8N1F7	819 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	SEPT1	Q8WYJ6	367 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	DOCK7	Q96N67	2140 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	MAP3K3	Q99759	626 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	PANK2	Q9BZ23	570 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	INTS9	Q9NV88	658 aa	Known RBP	4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	FLRT3	Q9NZU0	649 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	ICAM5	Q9UMF0	924 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	TNN	Q9UQP3	1299 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	LRP12	Q9Y561	859 aa		4.21	□□□□□ -1.73
KTN1-223	ENST00000555573	GREB1L	Q9C091	1923 aa	Predicted RBP	4.21	□□□□□ -1.74
KTN1-223	ENST00000555573	KIAA1210	Q9ULL0	1709 aa		4.21	□□□□□ -1.74
KTN1-223	ENST00000555573	ANKRD34C	P0C6C1	535 aa		4.21	□□□□□ -1.74
KTN1-223	ENST00000555573	ITGA3	P26006	1051 aa		4.21	□□□□□ -1.74
KTN1-223	ENST00000555573	SOAT1	P35610	550 aa		4.21	□□□□□ -1.74
KTN1-223	ENST00000555573	TIMP3	P35625	211 aa		4.21	□□□□□ -1.74
KTN1-223	ENST00000555573	HNRNPA0	Q13151	305 aa	Known RBP	4.21	□□□□□ -1.74
KTN1-223	ENST00000555573	LYSMD4	Q5XG99	296 aa		4.21	□□□□□ -1.74
KTN1-223	ENST00000555573	CEACAM20	Q6UY09	585 aa		4.21	□□□□□ -1.74
KTN1-223	ENST00000555573	C15orf39	Q6ZRI6	1047 aa		4.21	□□□□□ -1.74
KTN1-223	ENST00000555573	LINC00696	Q6ZRV3	163 aa		4.21	□□□□□ -1.74
KTN1-223	ENST00000555573	SLC16A9	Q7RTY1	509 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms