RNA–Protein interactions for RNA: ENST00000555470.1

PPP4R3A-209, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 3

Gene PPP4R3A, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-209	ENST00000555470	PIK3R1	P27986	724 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	MARCKS	P29966	332 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	HSD17B3	P37058	310 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	CAPG	P40121	348 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	GPR12	P47775	334 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	PEX5	P50542	639 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	MTCP1	P56278	107 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	SNRPE	P62304	92 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	ACY1	Q03154	408 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	SLC10A2	Q12908	348 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	PRKAA1	Q13131	559 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	MELK	Q14680	651 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	ZRSR1	Q15695	479 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	PFKFB3	Q16875	520 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	KRT71	Q3SY84	523 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	PRAMEF7	Q5VXH5	474 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	FCRLB	Q6BAA4	426 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	SUMO4	Q6EEV6	95 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	FIGLA	Q6QHK4	219 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	DHRS13	Q6UX07	377 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	TPRG1	Q6ZUI0	275 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	ATG9A	Q7Z3C6	839 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	C1QL2	Q7Z5L3	287 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	IRF2BP2	Q7Z5L9	587 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	ANKRD46	Q86W74	232 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	TMC8	Q8IU68	726 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	C1orf87	Q8N0U7	546 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	ZNF321P	Q8N8H1	164 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	SPERT	Q8NA61	448 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	PAPD5	Q8NDF8	572 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	STKLD1	Q8NE28	680 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	GOLGA5	Q8TBA6	731 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	ATP8B4	Q8TF62	1192 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	FCGR1B	Q92637	280 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	INPP5D	Q92835	1189 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	CELF1	Q92879	486 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	SNAPC3	Q92966	411 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	PEX13	Q92968	403 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	FAM46B	Q96A09	425 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	THOC3	Q96J01	351 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	AGAP3	Q96P47	875 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	MYADM	Q96S97	322 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	JPH2	Q9BR39	696 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	TMEM39B	Q9GZU3	492 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	CUEDC2	Q9H467	287 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	RAD21L1	Q9H4I0	556 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	TBC1D17	Q9HA65	648 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	WDR6	Q9NNW5	1121 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	HYPK	Q9NX55	129 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	BARHL2	Q9NY43	387 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	FLRT1	Q9NZU1	646 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	NDRG3	Q9UGV2	375 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	RNF150	Q9ULK6	438 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	CLEC4A	Q9UMR7	237 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	CHMP2B	Q9UQN3	213 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	HBS1L	Q9Y450	684 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	N6AMT1	Q9Y5N5	214 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	PTCH1	Q13635	1447 aa		4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	ASTN2	O75129	1339 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470		A0A075B6Q4	140 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	WDR91	A4D1P6	747 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	MANSC4	A6NHS7	340 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470		H3BMM5	538 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	NDUFS8	O00217	210 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	SLC28A1	O00337	649 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	ANKRD28	O15084	1053 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	RNMT	O43148	476 aa	Known RBP	4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	NMT2	O60551	498 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	MTRF1	O75570	445 aa	Known RBP	4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	FLOT1	O75955	427 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	AGT	P01019	485 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	IL1B	P01584	269 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	UGT2B4	P06133	528 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	CELA2A	P08217	269 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	ANKRD34C	P0C6C1	535 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	UQCRFS1P1	P0C7P4	283 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	UBTFL6	P0CB48	400 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	STAG3L3	P0CL85	134 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	SAG	P10523	405 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	AKR1A1	P14550	325 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	CPA3	P15088	417 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	DDX5	P17844	614 aa	Known RBP	4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	ITPKB	P27987	946 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	RFC2	P35250	354 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	HSD17B2	P37059	387 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	EPS15	P42566	896 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	OR1G1	P47890	313 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	LHX1	P48742	406 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	FMO5	P49326	533 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	AIF1	P55008	147 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	HUNK	P57058	714 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	CARD18	P57730	90 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	PROK1	P58294	105 aa		4.25	□□□□□ -1.73
PPP4R3A-209	ENST00000555470	SST	P61278	116 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms