RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 RABEPKQ7Z6M1 372 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 TRIM73Q86UV7 250 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 TRIM48Q8IWZ4 208 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 Q8N9G6 341 aaPredicted RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 MAGEC3Q8TD91 643 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 NEIL2Q969S2 332 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 ATP6V1E2Q96A05 226 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 ZNF382Q96SR6 550 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 PRRX2Q99811 253 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 TRMOQ9BU70 441 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 EDEM2Q9BV94 578 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 TMEM120AQ9BXJ8 343 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 TRIM55Q9BYV6 548 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 KLHL25Q9H0H3 589 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 SPNS1Q9H2V7 528 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 WDR55Q9H6Y2 383 aaPredicted RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 MVB12BQ9H7P6 319 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 NLGN3Q9NZ94 848 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 ADAMTS20P59510 1910 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 KIR2DS5A0A0G2JLQ3 304 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 A0A0G2JNG1 304 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 GOLGA8QA0A0J9YX86 632 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 GOLGA8OA6NCC3 632 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 OR6C74A6NCV1 312 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 C4orf47A7E2U8 309 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 GOLGA8NF8WBI6 632 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 KIR2DS3K7RE56 304 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 MATN2O00339 956 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 RRP9O43818 475 aaKnown RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 PRICKLE3O43900 615 aaPredicted RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 SH3BP5O60239 455 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 ESRRBO95718 433 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 MLYCDO95822 493 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 CAPN1P07384 714 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 TROVE2P10155 538 aaKnown RBP eCLIP10.39□□□□□ -0.75
TDP1-211ENST00000555178 HOXB3P14651 431 aaPredicted RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 NPPBP16860 134 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 POLR2CP19387 275 aaPredicted RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 VARSP26640 1264 aaKnown RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 RAB28P51157 221 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 GALNT1Q10472 559 aaPredicted RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 CDC16Q13042 620 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 KIR2DS5Q14953 304 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 CYP2A13Q16696 494 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 UGT3A2Q3SY77 523 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 CATSPEREQ5SY80 951 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 THEMIS2Q5TEJ8 643 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 ADNP2Q6IQ32 1131 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 IL27RAQ6UWB1 636 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 OR10G6Q8NH81 332 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 LCN9Q8WX39 176 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 ATL1Q8WXF7 558 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 SEC16BQ96JE7 1060 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 SGPP1Q9BX95 441 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 TUBB1Q9H4B7 451 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 EML4Q9HC35 981 aaKnown RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 CCDC177Q9NQR7 707 aaPredicted RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 FARSBQ9NSD9 589 aaKnown RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 EVA1BQ9NVM1 165 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 DNAAF2Q9NVR5 837 aaKnown RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 CUEDC1Q9NWM3 386 aaPredicted RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 TMEM9Q9P0T7 183 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 KLHL14Q9P2G3 628 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 LRIT1Q9P2V4 623 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 GIMAP2Q9UG22 337 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 TAC3Q9UHF0 121 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 TRAF6Q9Y4K3 522 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 DNAJC15Q9Y5T4 150 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 CNOT1A5YKK6 2376 aaKnown RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 SCN3AQ9NY46 2000 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 IGKV1-8A0A0C4DH67 115 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 CPED1A4D0V7 1026 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 AZIN1O14977 448 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 PCDHGA12O60330 932 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 TGDSO95455 350 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 DPP6P42658 865 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 FASLGP48023 281 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 ATXN3P54252 364 aaPredicted RBP10.38□□□□□ -0.75
TDP1-211ENST00000555178 MEF2AQ02078 507 aaPredicted RBP10.38□□□□□ -0.75
TDP1-211ENST00000555178 BTKQ06187 659 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 PLCL1Q15111 1095 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 CSRP2Q16527 193 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 GKAP1Q5VSY0 366 aaPredicted RBP10.38□□□□□ -0.75
TDP1-211ENST00000555178 KANK2Q63ZY3 851 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 CAPN13Q6MZZ7 669 aaPredicted RBP10.38□□□□□ -0.75
TDP1-211ENST00000555178 DBX2Q6ZNG2 339 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 TMPRSS11BQ86T26 416 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 ALYREFQ86V81 257 aaKnown RBP10.38□□□□□ -0.75
TDP1-211ENST00000555178 RNF175Q8N4F7 328 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 ARL10Q8N8L6 244 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 CCDC74AQ96AQ1 378 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 C3orf30Q96M34 536 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 OR52B2Q96RD2 323 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 ACTR8Q9H981 624 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 POT1Q9NUX5 634 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 PADI4Q9UM07 663 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 HEBP2Q9Y5Z4 205 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 COLEC10Q9Y6Z7 277 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 ATP6AP2A0A1C7CYW4 349 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 AGRPO00253 132 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms