RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 MROH9Q5TGP6 573 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 ICE2Q659A1 982 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 FRMPD2BQ6IN97 320 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 LRRC8EQ6NSJ5 796 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 FBXO42Q6P3S6 717 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 AGTRAPQ6RW13 159 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 C6orf15Q6UXA7 325 aaPredicted RBP11.86□□□□□ -0.51
SYNE2-214ENST00000554928 TMEM126BQ8IUX1 230 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 PLD3Q8IV08 490 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 MCATQ8IVS2 390 aaKnown RBP11.86□□□□□ -0.51
SYNE2-214ENST00000554928 OR4N4Q8N0Y3 316 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 RAB42Q8N4Z0 105 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 NKAPQ8N5F7 415 aaKnown RBP11.86□□□□□ -0.51
SYNE2-214ENST00000554928 IL22RA1Q8N6P7 574 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 MCOLN3Q8TDD5 553 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 SLC22A18Q96BI1 424 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 ALKBH8Q96BT7 664 aaKnown RBP11.86□□□□□ -0.51
SYNE2-214ENST00000554928 PTERQ96BW5 349 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 PYCR2Q96C36 320 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 CCDC138Q96M89 665 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 CCNL2Q96S94 520 aaPredicted RBP11.86□□□□□ -0.51
SYNE2-214ENST00000554928 CHRNA10Q9GZZ6 450 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 EURLQ9NYK6 297 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.86□□□□□ -0.51
SYNE2-214ENST00000554928 CROTQ9UKG9 612 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 V9GYY5 206 aaPredicted RBP11.86□□□□□ -0.51
SYNE2-214ENST00000554928 LOC400499M0QZD8 3231 aa11.86□□□□□ -0.51
SYNE2-214ENST00000554928 A0A0J9YVX5 310 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 OR2A25A4D2G3 310 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 ZNF749O43361 778 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 STATHP02808 62 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 MSL3P1P0C860 447 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 CCDC166P0CW27 439 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 STMN1P16949 149 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 GCAP28676 217 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 RORAP35398 523 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 STAT5AP42229 794 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 GCGRP47871 477 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 SLC12A2P55011 1212 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 ITGA1P56199 1179 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 FOXL2P58012 376 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 RAB10P61026 200 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 NFKB2Q00653 900 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 NAB1Q13506 487 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 CSHL1Q14406 222 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 PTCHD3Q3KNS1 767 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 FBXO48Q5FWF7 155 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 ATP1A1-AS1Q5TC04 95 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 FAM69BQ5VUD6 431 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 ZNF425Q6IV72 752 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 PAQR7Q86WK9 346 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 ZNF655Q8N720 491 aaPredicted RBP11.85□□□□□ -0.51
SYNE2-214ENST00000554928 CT55Q8WUE5 264 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 SLC44A1Q8WWI5 657 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 MED8Q96G25 268 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 OR4K3Q96R72 315 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 CYTH2Q99418 400 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 PLCD4Q9BRC7 762 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 SGPP1Q9BX95 441 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 DERL2Q9GZP9 239 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 POPDC3Q9HBV1 291 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 SYTL2Q9HCH5 934 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 MRPS30Q9NP92 439 aaKnown RBP11.85□□□□□ -0.51
SYNE2-214ENST00000554928 LHX9Q9NQ69 397 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 IGSF5Q9NSI5 407 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 PCMTD2Q9NV79 361 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 INTS7Q9NVH2 962 aaKnown RBP11.85□□□□□ -0.51
SYNE2-214ENST00000554928 ARL15Q9NXU5 204 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 LHX6Q9UPM6 363 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 PLCL2Q9UPR0 1127 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 PCDHGA4Q9Y5G9 962 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 KLK4Q9Y5K2 254 aa11.85□□□□□ -0.51
SYNE2-214ENST00000554928 E7EQ34 232 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 POC1B-GALNT4F8VUJ3 575 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 H7BY64 318 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 K7ENP7 123 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 HAT1O14929 419 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 RIPK2O43353 540 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 CPNE3O75131 537 aaKnown RBP11.84□□□□□ -0.51
SYNE2-214ENST00000554928 OR2B3O76000 313 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 ALDOAP04075 364 aaKnown RBP11.84□□□□□ -0.51
SYNE2-214ENST00000554928 ITGAXP20702 1163 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 CMPK1P30085 196 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 PHBP35232 272 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 HSD17B2P37059 387 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 ATP1A2P50993 1020 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 PMS2P54278 862 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 VSX2P58304 361 aaPredicted RBP11.84□□□□□ -0.51
SYNE2-214ENST00000554928 RPS18P62269 152 aaKnown RBP11.84□□□□□ -0.51
SYNE2-214ENST00000554928 PRDX1Q06830 199 aaKnown RBP11.84□□□□□ -0.51
SYNE2-214ENST00000554928 ABHD18Q0P651 414 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 MAP7Q14244 749 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 THEMIS2Q5TEJ8 643 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 C1orf189Q5VU69 101 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 BROXQ5VW32 411 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 PRAMEF13Q5VWM6 474 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 ZNF385CQ66K41 422 aaPredicted RBP11.84□□□□□ -0.51
SYNE2-214ENST00000554928 INO80CQ6PI98 192 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms