RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 VPS4AQ9UN37 437 aa11.8□□□□□ -0.52
CCDC85C-202ENST00000554877 TEX264Q9Y6I9 313 aa11.8□□□□□ -0.52
CCDC85C-202ENST00000554877 SNRNP200O75643 2136 aaKnown RBP11.8□□□□□ -0.52
CCDC85C-202ENST00000554877 SEC16AO15027 2179 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 A0A1B0GX78 115 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 FAM187AA6NFU0 413 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 ARHGEF33A8MVX0 844 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 SMAPO00193 183 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 DPM1O60762 260 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 C1QAP02745 245 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 STATHP02808 62 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 CATP04040 527 aaKnown RBP11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 CD63P08962 238 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 PIM1P11309 404 aaPredicted RBP11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 GNLYP22749 145 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 ITGA3P26006 1051 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 MPP1Q00013 466 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 TIAL1Q01085 375 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 CRYMQ14894 314 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 LONRF1Q17RB8 773 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 FAM214AQ32MH5 1076 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 TCTE1Q5JU00 501 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 HP1BP3Q5SSJ5 553 aaPredicted RBP11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 THEMIS2Q5TEJ8 643 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 CNTN4Q8IWV2 1026 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 PARP9Q8IXQ6 854 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 OR2L3Q8NG85 312 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 OR2Y1Q8NGV0 311 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 DENND1AQ8TEH3 1009 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 MIB2Q96AX9 1013 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 ALKBH8Q96BT7 664 aaKnown RBP11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 SNF8Q96H20 258 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 FER1L6-AS2Q96M78 137 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 ERP44Q9BS26 406 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 CHRNA10Q9GZZ6 450 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 SLC22A11Q9NSA0 550 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 VPS9D1Q9Y2B5 631 aa11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 PCDHGA9Q9Y5G4 932 aaKnown RBP11.79□□□□□ -0.52
CCDC85C-202ENST00000554877 MED13Q9UHV7 2174 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 A0A1W2PPV9 198 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 HYKKA2RU49 373 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 EFCAB8A8MWE9 144 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 TARM1B6A8C7 271 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 FFAR3O14843 346 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 DSCR3O14972 297 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 GPR42O15529 346 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 PRICKLE3O43900 615 aaPredicted RBP11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 HAUS5O94927 633 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 MATN4O95460 622 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 UMODP07911 640 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 PGAM1P18669 254 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 GABRB3P28472 473 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 SLC1A2P43004 574 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 UQCRFS1P47985 274 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 FRG1Q14331 258 aaKnown RBP11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 FASTKD3Q14CZ7 662 aaKnown RBP11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 TRADDQ15628 312 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 RBBP7Q16576 425 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 TTLL9Q3SXZ7 439 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 BBS9Q3SYG4 887 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 PRR30Q53SZ7 412 aaPredicted RBP11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 HSP90AA5PQ58FG0 334 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 DCAF10Q5QP82 559 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 JMJD6Q6NYC1 403 aaPredicted RBP11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 MRPL14Q6P1L8 145 aaKnown RBP11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 FBXO42Q6P3S6 717 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 ZNF549Q6P9A3 640 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 ZDHHC24Q6UX98 284 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 OVCH1Q7RTY7 1134 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 GALNT16Q8N428 558 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 OR2A1Q8NGT9 310 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 SMPDL3AQ92484 453 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 LRRC39Q96DD0 335 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 CABS1Q96KC9 395 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 IP6K3Q96PC2 410 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 GPR21Q99679 349 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 MCMBPQ9BTE3 642 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 ATP13A2Q9NQ11 1180 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 PPANQ9NQ55 473 aaKnown RBP11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 FAM114A2Q9NRY5 505 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 INTS10Q9NVR2 710 aaKnown RBP11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 SPATA7Q9P0W8 599 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 TAC3Q9UHF0 121 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 FBXO5Q9UKT4 447 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 SNX24Q9Y343 169 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 MYO18BQ8IUG5 2567 aa11.78□□□□□ -0.52
CCDC85C-202ENST00000554877 CCDC88CQ9P219 2028 aa11.77□□□□□ -0.52
CCDC85C-202ENST00000554877 CYSRT1A8MQ03 144 aa11.77□□□□□ -0.53
CCDC85C-202ENST00000554877 H0YGG7 62 aa11.77□□□□□ -0.53
CCDC85C-202ENST00000554877 SRPX2O60687 465 aaPredicted RBP11.77□□□□□ -0.53
CCDC85C-202ENST00000554877 ITGAXP20702 1163 aa11.77□□□□□ -0.53
CCDC85C-202ENST00000554877 ELK3P41970 407 aa11.77□□□□□ -0.53
CCDC85C-202ENST00000554877 GLRBP48167 497 aa11.77□□□□□ -0.53
CCDC85C-202ENST00000554877 CLCN7P51798 805 aa11.77□□□□□ -0.53
CCDC85C-202ENST00000554877 PNLIPRP1P54315 467 aa11.77□□□□□ -0.53
CCDC85C-202ENST00000554877 ARF3P61204 181 aaPredicted RBP11.77□□□□□ -0.53
CCDC85C-202ENST00000554877 OCA2Q04671 838 aa11.77□□□□□ -0.53
CCDC85C-202ENST00000554877 INPP5JQ15735 1006 aaPredicted RBP11.77□□□□□ -0.53
CCDC85C-202ENST00000554877 NKG7Q16617 165 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms